About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf363_0.0
PE_Scaf363_0.3SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
PE_Scaf3640_0.3TRANSCRIPTION TERMINATION FACTOR, MITOCHONDRIAL
PE_Scaf3640_10.0SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf3640_11.1ARSENITE METHYLTRANSFERASE
PE_Scaf3640_13.0
PE_Scaf3640_15.8MYOSIN LIGHT CHAIN 1, 3
PE_Scaf3640_2.4REGULATOR-RELATED
PE_Scaf3640_2.6UNCHARACTERIZED
PE_Scaf3640_3.4AROMATIC AMINO ACID HYDROXYLASE
PE_Scaf3640_3.8
PE_Scaf3640_4.0
PE_Scaf3640_5.1RING FINGER PROTEIN 17
PE_Scaf3640_7.21SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf3640_7.3SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf3640_7.4SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf3640_7.5SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf3640_8.1SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf3640_8.25SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf3640_8.4SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf3640_8.5SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf3640_9.4SERINE PROTEASE INHIBITOR, SERPIN
PE_Scaf3641_1.0
PE_Scaf3641_2.4
PE_Scaf3641_3.0
PE_Scaf3641_4.0ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1
PE_Scaf3641_5.8UNCHARACTERIZED
PE_Scaf3641_5.9UNCHARACTERIZED
PE_Scaf3642_2.0AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
PE_Scaf3644_0.0
PE_Scaf3644_2.6
PE_Scaf3644_2.9ACETYL-COA C-ACYLTRANSFERASE
PE_Scaf3645_0.0
PE_Scaf3645_0.1
PE_Scaf3645_0.2
PE_Scaf3648_1.4
PE_Scaf364_0.5CYSTEINE DIOXYGENASE
PE_Scaf364_1.0
PE_Scaf364_1.3ATP-DEPENDENT RNA HELICASE
PE_Scaf364_1.5ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY
PE_Scaf3651_0.0
PE_Scaf3651_2.3EAP30 SUBUNIT OF ELL COMPLEX
PE_Scaf3651_2.5
PE_Scaf3653_0.0
PE_Scaf3653_0.2
PE_Scaf3654_0.2DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
PE_Scaf3654_1.3KRUEPPEL-LIKE TRANSCRIPTION FACTOR
PE_Scaf3655_0.12
PE_Scaf3655_0.7MONOCARBOXYLATE TRANSPORTER
PE_Scaf3655_0.8TYROSINASE FAMILY MEMBER
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