About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf3830_3.0LD33804P
PE_Scaf3830_3.1
PE_Scaf3830_3.5NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 3
PE_Scaf3830_3.6UNCHARACTERIZED
PE_Scaf3830_5.4ATROPHIN-RELATED
PE_Scaf3831_0.0
PE_Scaf3831_0.1
PE_Scaf3832_0.0-
PE_Scaf3832_1.0
PE_Scaf3832_1.12
PE_Scaf3832_1.2SERINE/ARGININE REPETITIVE MATRIX PROTEIN 5-RELATED
PE_Scaf3834_5.3COLLAGEN ALPHA
PE_Scaf3834_6.4
PE_Scaf3834_8.12
PE_Scaf3834_8.13TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
PE_Scaf3834_8.14PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED
PE_Scaf3834_8.15SERINE/THREONINE-PROTEIN KINASE
PE_Scaf3834_8.20
PE_Scaf3834_8.21
PE_Scaf3836_0.1CHARGED MULTIVESICULAR BODY PROTEIN
PE_Scaf3836_0.2
PE_Scaf3836_1.1CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA
PE_Scaf3836_2.4-
PE_Scaf3836_4.2
PE_Scaf3836_4.5PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
PE_Scaf3836_5.10
PE_Scaf3837_1.0
PE_Scaf3837_1.5
PE_Scaf3837_2.3
PE_Scaf3838_0.2
PE_Scaf3841_0.0
PE_Scaf3841_0.1
PE_Scaf3846_0.2EXPRESSED PROTEIN
PE_Scaf3847_1.11GLUCOCORTICOID MODULATORY ELEMENT-BINDING PROTEIN
PE_Scaf384_1.0THAP DOMAIN-CONTAINING
PE_Scaf3853_0.1
PE_Scaf3853_0.5
PE_Scaf3853_0.6SMOOTH MUSCLE MYOSIN HEAVY CHAIN-RELATED
PE_Scaf3853_0.7E3 UBIQUITIN-PROTEIN LIGASE RNF8
PE_Scaf3853_1.0
PE_Scaf3853_1.1
PE_Scaf3853_1.8
PE_Scaf3853_11.4
PE_Scaf3853_11.5ACIDIC FIBROBLAST GROWTH FACTOR INTRACELLULAR BINDING PROTEIN
PE_Scaf3853_13.4
PE_Scaf3853_14.4TRANSMEMBRANE PROTEIN 260
PE_Scaf3853_16.1-
PE_Scaf3853_17.0
PE_Scaf3853_17.5RHO FAMILY GTPASE
PE_Scaf3853_17.6HL01030P-RELATED
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