About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold2384.11235
mRNA.BJAM.scaffold2386.11236FERREDOXIN/ADRENODOXIN
mRNA.BJAM.scaffold2387.11237MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB
mRNA.BJAM.scaffold2387.112385'-NUCLEOTIDASE DOMAIN-CONTAINING
mRNA.BJAM.scaffold2387.11239
mRNA.BJAM.scaffold2387.11240SYNAPTIC VESICLE GLYCOPROTEIN 2
mRNA.BJAM.scaffold2389.11241ATP-BINDING TRANSPORT PROTEIN-RELATED
mRNA.BJAM.scaffold2389.11242CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold2389.11243
mRNA.BJAM.scaffold239.1866DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold239.1867
mRNA.BJAM.scaffold239.1868
mRNA.BJAM.scaffold239.1869
mRNA.BJAM.scaffold2390.11244HEAT SHOCK PROTEIN 90 FAMILY MEMBER
mRNA.BJAM.scaffold2390.11245HEAT SHOCK PROTEIN 90 FAMILY MEMBER
mRNA.BJAM.scaffold2390.11246RNA-BINDING PROTEIN LUC7-RELATED
mRNA.BJAM.scaffold2390.11247
mRNA.BJAM.scaffold2390.11248UNCHARACTERIZED
mRNA.BJAM.scaffold2390.11249CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
mRNA.BJAM.scaffold2390.11250GUANINE NUCLEOTIDE EXCHANGE C9ORF72
mRNA.BJAM.scaffold2390.11251FORMATE DEHYDROGENASE 1
mRNA.BJAM.scaffold2390.11252IONOTROPIC RECEPTOR 20A-RELATED
mRNA.BJAM.scaffold2390.11253
mRNA.BJAM.scaffold2390.11254
mRNA.BJAM.scaffold2390.11255IONOTROPIC RECEPTOR 20A-RELATED
mRNA.BJAM.scaffold2390.11256HOMEOBOX PROTEIN NKX
mRNA.BJAM.scaffold2392.11257CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold2393.11258FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
mRNA.BJAM.scaffold2393.11259
mRNA.BJAM.scaffold2394.11260
mRNA.BJAM.scaffold2394.11261CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold2394.11262PEPTIDYL-TRNA HYDROLASE 2
mRNA.BJAM.scaffold2394.11263LEISHMANOLYSIN-LIKE PEPTIDASE
mRNA.BJAM.scaffold2394.11264STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold2394.11265STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold2394.11266STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold2395.11267
mRNA.BJAM.scaffold2395.11268E3 UBIQUITIN-PROTEIN LIGASE MIB2
mRNA.BJAM.scaffold2395.11269E3 UBIQUITIN-PROTEIN LIGASE MIB2
mRNA.BJAM.scaffold2396.11270CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL
mRNA.BJAM.scaffold2396.11271SOLUBLE NSF ATTACHMENT PROTEIN SNAP
mRNA.BJAM.scaffold2397.11272ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6
mRNA.BJAM.scaffold2397.11273BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
mRNA.BJAM.scaffold2398.11274MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED
mRNA.BJAM.scaffold2398.11275CENTROSOMAL PROTEIN OF 290 KDA
mRNA.BJAM.scaffold2398.11276CENTROSOMAL PROTEIN OF 290 KDA
mRNA.BJAM.scaffold2398.11277MYOGENIC FACTOR
mRNA.BJAM.scaffold2398.112785-HYDROXYTRYPTAMINE RECEPTOR
mRNA.BJAM.scaffold2399.11279IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX
mRNA.BJAM.scaffold2399.11280
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