About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold2332.11052CADHERIN-23
mRNA.BJAM.scaffold2332.11053OXIDOREDUCTASE GLYR1-RELATED
mRNA.BJAM.scaffold2332.11054CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold2332.11055OXIDOREDUCTASE GLYR1-RELATED
mRNA.BJAM.scaffold2333.11056INOSITOL 5-PHOSPHATASE
mRNA.BJAM.scaffold2333.11057PROTEASE M1 ZINC METALLOPROTEASE
mRNA.BJAM.scaffold2333.11058DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
mRNA.BJAM.scaffold2333.11059
mRNA.BJAM.scaffold2334.11060EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
mRNA.BJAM.scaffold2334.11061EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
mRNA.BJAM.scaffold2334.11062EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED
mRNA.BJAM.scaffold2334.11063RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
mRNA.BJAM.scaffold2335.11064COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
mRNA.BJAM.scaffold2335.11065SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
mRNA.BJAM.scaffold2336.11066DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold2337.1106740S RIBOSOMAL PROTEIN S7
mRNA.BJAM.scaffold2337.11068
mRNA.BJAM.scaffold2337.11069
mRNA.BJAM.scaffold2337.11070NETRIN/LAMININ-RELATED
mRNA.BJAM.scaffold2337.11071NETRIN/LAMININ-RELATED
mRNA.BJAM.scaffold2337.11072NETRIN/LAMININ-RELATED
mRNA.BJAM.scaffold2338.11073STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold2338.11074STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold2338.11075STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold2338.11076STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold2338.11077
mRNA.BJAM.scaffold2338.11078BEIGE/BEACH-RELATED
mRNA.BJAM.scaffold2339.11079FARNESYL-PYROPHOSPHATE SYNTHETASE
mRNA.BJAM.scaffold2339.11080FARNESYL-PYROPHOSPHATE SYNTHETASE
mRNA.BJAM.scaffold2339.11081
mRNA.BJAM.scaffold2339.11082NITRIC OXIDE-ASSOCIATED PROTEIN 1
mRNA.BJAM.scaffold234.1848-
mRNA.BJAM.scaffold234.1849
mRNA.BJAM.scaffold234.1850SERINE-THREONINE PROTEIN KINASE
mRNA.BJAM.scaffold234.1851
mRNA.BJAM.scaffold234.1852FAT ATYPICAL CADHERIN-RELATED
mRNA.BJAM.scaffold234.1853HISTONE-LYSINE N-METHYLTRANSFERASE SETD1
mRNA.BJAM.scaffold234.1854
mRNA.BJAM.scaffold234.1855
mRNA.BJAM.scaffold234.1856G-PROTEIN COUPLED RECEPTOR
mRNA.BJAM.scaffold234.1857ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
mRNA.BJAM.scaffold234.1858
mRNA.BJAM.scaffold234.1859TRANSMEMBRANE PROTEIN 199
mRNA.BJAM.scaffold234.1860TGF-BETA-ACTIVATED KINASE 1 AND MAP3K7-BINDING PROTEIN TAB
mRNA.BJAM.scaffold234.1861
mRNA.BJAM.scaffold2340.11083
mRNA.BJAM.scaffold2341.11084NEUROPEPTIDE Y RECEPTOR
mRNA.BJAM.scaffold2342.11085
mRNA.BJAM.scaffold2342.11086REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN
mRNA.BJAM.scaffold2342.11087REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN
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