About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold2358.11138UNCHARACTERIZED
mRNA.BJAM.scaffold2358.11139UNCHARACTERIZED
mRNA.BJAM.scaffold2358.11140
mRNA.BJAM.scaffold2359.11141
mRNA.BJAM.scaffold2359.11142NUCLEAR HORMONE RECEPTOR HR3-RELATED
mRNA.BJAM.scaffold2359.11143
mRNA.BJAM.scaffold236.1863RNA POLYMERASE II-ASSOCIATED PROTEIN 3
mRNA.BJAM.scaffold236.1864YEAST SPT2-RELATED
mRNA.BJAM.scaffold2360.11144DIACYLGLYCEROL KINASE
mRNA.BJAM.scaffold2360.11145DIACYLGLYCEROL KINASE
mRNA.BJAM.scaffold2360.11146
mRNA.BJAM.scaffold2360.11147CENTROSOMAL PROTEIN 2
mRNA.BJAM.scaffold2360.11148MYOSIN HEAVY CHAIN, NON-MUSCLE
mRNA.BJAM.scaffold2360.11149
mRNA.BJAM.scaffold2360.11150HYDROLASE
mRNA.BJAM.scaffold2360.11151TETRATRICOPEPTIDE REPEAT PROTEIN 19
mRNA.BJAM.scaffold2361.11152BEAT PROTEIN
mRNA.BJAM.scaffold2361.11153BEAT PROTEIN
mRNA.BJAM.scaffold2363.11154CULLIN
mRNA.BJAM.scaffold2363.11155CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold2363.11156
mRNA.BJAM.scaffold2364.11157
mRNA.BJAM.scaffold2364.11158NEP1/MRA1
mRNA.BJAM.scaffold2364.11159CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX19
mRNA.BJAM.scaffold2364.11160SH3 ADAPTER PROTEIN SPIN90 NCK INTERACTING PROTEIN WITH SH3 DOMAIN
mRNA.BJAM.scaffold2364.11161
mRNA.BJAM.scaffold2364.11162BCL-2 RELATED
mRNA.BJAM.scaffold2364.11163BCAS2 PROTEIN
mRNA.BJAM.scaffold2364.11164HSC70CB, ISOFORM G-RELATED
mRNA.BJAM.scaffold2365.11165DNA-DIRECTED RNA POLYMERASE
mRNA.BJAM.scaffold2365.11166DNA-DIRECTED RNA POLYMERASE
mRNA.BJAM.scaffold2365.11167
mRNA.BJAM.scaffold2365.11168DNA-DIRECTED RNA POLYMERASE SUBUNIT K
mRNA.BJAM.scaffold2367.11169
mRNA.BJAM.scaffold2367.11170SIDESTEP PROTEIN
mRNA.BJAM.scaffold2367.11171SIDESTEP PROTEIN
mRNA.BJAM.scaffold2367.11172SIDESTEP PROTEIN
mRNA.BJAM.scaffold2367.11173
mRNA.BJAM.scaffold2368.11174
mRNA.BJAM.scaffold2368.11175
mRNA.BJAM.scaffold2368.11176ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE
mRNA.BJAM.scaffold2369.11177MAP/MICROTUBULE AFFINITY-REGULATING KINASE
mRNA.BJAM.scaffold2370.11178
mRNA.BJAM.scaffold2370.11179TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS
mRNA.BJAM.scaffold2372.11180CLE
mRNA.BJAM.scaffold2372.111814.1 G PROTEIN
mRNA.BJAM.scaffold2372.11182DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL
mRNA.BJAM.scaffold2372.11183
mRNA.BJAM.scaffold2372.11184SLR5058 PROTEIN
mRNA.BJAM.scaffold2372.11185
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