About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold2372.11186
mRNA.BJAM.scaffold2373.11187
mRNA.BJAM.scaffold2374.11188SMAD
mRNA.BJAM.scaffold2374.11189DNA-BINDING PROTEIN INHIBITOR
mRNA.BJAM.scaffold2375.11190
mRNA.BJAM.scaffold2375.11191CONTACTIN 5
mRNA.BJAM.scaffold2375.11192PROTEIN SIDEKICK
mRNA.BJAM.scaffold2375.11193
mRNA.BJAM.scaffold2375.11194
mRNA.BJAM.scaffold2376.11195
mRNA.BJAM.scaffold2376.11196
mRNA.BJAM.scaffold2377.11197NUCLEAR RECEPTOR SUBFAMILY 5 GROUP A
mRNA.BJAM.scaffold2377.11198EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H
mRNA.BJAM.scaffold2377.11199
mRNA.BJAM.scaffold2377.11200BEAT PROTEIN
mRNA.BJAM.scaffold2377.11201CBF1 INTERACTING COREPRESSOR CIR
mRNA.BJAM.scaffold2377.11202
mRNA.BJAM.scaffold2377.11203N-ACETYLTRANSFERASE 6
mRNA.BJAM.scaffold2378.11204U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3
mRNA.BJAM.scaffold2378.11205HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED
mRNA.BJAM.scaffold2378.11206
mRNA.BJAM.scaffold2378.11207
mRNA.BJAM.scaffold2378.11208CCR4-NOT TRANSCRIPTION COMPLEX RELATED
mRNA.BJAM.scaffold2378.11209CYPHER, ISOFORM B
mRNA.BJAM.scaffold2378.11210PROTEIN MAGO NASHI HOMOLOG
mRNA.BJAM.scaffold2378.11211LANC-LIKE PROTEIN
mRNA.BJAM.scaffold2378.11212ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
mRNA.BJAM.scaffold2378.11213ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
mRNA.BJAM.scaffold2378.11214ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
mRNA.BJAM.scaffold2379.11215PIKACHURIN-LIKE PROTEIN
mRNA.BJAM.scaffold2379.11216
mRNA.BJAM.scaffold238.1865
mRNA.BJAM.scaffold2381.11217
mRNA.BJAM.scaffold2381.11218UNKEMPT FAMILY MEMBER
mRNA.BJAM.scaffold2381.11219
mRNA.BJAM.scaffold2381.11220
mRNA.BJAM.scaffold2381.11221
mRNA.BJAM.scaffold2381.11222
mRNA.BJAM.scaffold2381.11223
mRNA.BJAM.scaffold2382.11224HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
mRNA.BJAM.scaffold2382.11225ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold2382.11226
mRNA.BJAM.scaffold2382.11227NEURON-DERIVED NEUROTROPHIC FACTOR
mRNA.BJAM.scaffold2382.11228
mRNA.BJAM.scaffold2383.11229
mRNA.BJAM.scaffold2383.11230MITOGEN-ACTIVATED PROTEIN KINASE
mRNA.BJAM.scaffold2383.11231
mRNA.BJAM.scaffold2383.11232ATF6, ISOFORM C
mRNA.BJAM.scaffold2383.11233TYROSINE-PROTEIN KINASE RECEPTOR
mRNA.BJAM.scaffold2383.11234CDC68 RELATED
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