Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00073010 | THYMIDYLATE SYNTHASE 1 |
| SKAU_T00073020 | ENOLASE SUPERFAMILY, MANDELATE RACEMASE |
| SKAU_T00073030 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA |
| SKAU_T00073040 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA |
| SKAU_T00073050 | CLUSTERIN |
| SKAU_T00073060 | |
| SKAU_T00073070 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| SKAU_T00073080 | VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE |
| SKAU_T00073090 | JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE |
| SKAU_T00073100 | TRANSMEMBRANE PROTEIN 236 |
| SKAU_T00073110 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| SKAU_T00073120 | SOLUTE CARRIER FAMILY 39 |
| SKAU_T00073130 | |
| SKAU_T00073140 | |
| SKAU_T00073150 | |
| SKAU_T00073160 | |
| SKAU_T00073170 | VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNIT |
| SKAU_T00073180 | |
| SKAU_T00073190 | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
| SKAU_T00073200 | |
| SKAU_T00073210 | ADP RIBOSYLATION FACTOR-RELATED |
| SKAU_T00073220 | |
| SKAU_T00073230 | |
| SKAU_T00073240 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
| SKAU_T00073250 | |
| SKAU_T00073260 | TUMOR ENDOTHELIAL MARKER 7 RELATED |
| SKAU_T00073270 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| SKAU_T00073280 | CHARGED MULTIVESICULAR BODY PROTEIN |
| SKAU_T00073290 | ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED |
| SKAU_T00073300 | PROLACTIN-RELEASING PEPTIDE |
| SKAU_T00073310 | MYELIN-ASSOCIATED OLIGODENDROCYTIC BASIC PROTEIN MOBP -RELATED |
| SKAU_T00073320 | |
| SKAU_T00073330 | |
| SKAU_T00073340 | |
| SKAU_T00073350 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED |
| SKAU_T00073360 | CELL ADHESION MOLECULE |
| SKAU_T00073370 | UBIQUITIN-ACTIVATING ENZYME E1 |
| SKAU_T00073380 | TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) |
| SKAU_T00073390 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00073400 | |
| SKAU_T00073410 | |
| SKAU_T00073420 | DISKS LARGE-ASSOCIATED PROTEIN DAP SAP90/PSD-95-ASSOCIATED PROTEIN |
| SKAU_T00073430 | |
| SKAU_T00073440 | DISKS LARGE-ASSOCIATED PROTEIN DAP SAP90/PSD-95-ASSOCIATED PROTEIN |
| SKAU_T00073450 | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
| SKAU_T00073460 | OTU DOMAIN CONTAINING PROTEIN |
| SKAU_T00073470 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00073480 | |
| SKAU_T00073490 | |
| SKAU_T00073500 | P140CAP/SNIP-RELATED |
