Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00072010 | TRANSLOCATION ASSOCIATED MEMBRANE PROTEIN |
| SKAU_T00072020 | NUCLEAR RECEPTOR COACTIVATOR |
| SKAU_T00072030 | |
| SKAU_T00072040 | ZINC FINGER PROTEIN ZIC AND GLI |
| SKAU_T00072050 | |
| SKAU_T00072060 | |
| SKAU_T00072070 | ORGANIC ANION TRANSPORTER |
| SKAU_T00072080 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| SKAU_T00072090 | SIMILAR TO HYPOTHETICAL PROTEIN |
| SKAU_T00072100 | DEP DOMAIN PROTEIN |
| SKAU_T00072110 | DEP DOMAIN PROTEIN |
| SKAU_T00072120 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
| SKAU_T00072130 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| SKAU_T00072140 | CENTROSOME SPINDLE POLE ASSOCIATED PROTEIN |
| SKAU_T00072150 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED |
| SKAU_T00072160 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| SKAU_T00072170 | |
| SKAU_T00072180 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
| SKAU_T00072190 | RIBOSOMAL PROTEIN S6 KINASE |
| SKAU_T00072200 | DEUBIQUITINATING PROTEIN VCIP135 |
| SKAU_T00072210 | MYB PROTEIN-RELATED |
| SKAU_T00072220 | RIBOSOME BIOGENESIS REGULATORY PROTEIN |
| SKAU_T00072230 | CORTICOLIBERIN/UROCORTIN |
| SKAU_T00072240 | DNAJ HOMOLOG SUBFAMILY C MEMBER 5 HOMOLOG |
| SKAU_T00072250 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| SKAU_T00072260 | PROTEIN OF UNKNOWN FUNCTION DUF729 |
| SKAU_T00072270 | ARMADILLO REPEAT-CONTAINING PROTEIN 1 |
| SKAU_T00072280 | |
| SKAU_T00072290 | |
| SKAU_T00072300 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
| SKAU_T00072310 | |
| SKAU_T00072320 | |
| SKAU_T00072330 | YTH YT521-B HOMOLOGY DOMAIN-CONTAINING |
| SKAU_T00072340 | |
| SKAU_T00072350 | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE |
| SKAU_T00072360 | T-CELL LYMPHOMA BREAKPOINT-ASSOCIATED TARGET 1-RELATED |
| SKAU_T00072370 | ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE |
| SKAU_T00072380 | ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE |
| SKAU_T00072390 | ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED |
| SKAU_T00072400 | |
| SKAU_T00072410 | |
| SKAU_T00072420 | |
| SKAU_T00072430 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 9 |
| SKAU_T00072440 | DRAB11-RELATED |
| SKAU_T00072450 | CARBONIC ANHYDRASE |
| SKAU_T00072460 | |
| SKAU_T00072470 | AGAP000281-PA |
| SKAU_T00072480 | BEIGE/BEACH-RELATED |
| SKAU_T00072490 | CYTOCHROME P450 FAMILY 7 |
| SKAU_T00072500 | AGAP005440-PA |
