Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00070510 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G |
| SKAU_T00070520 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00070530 | DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT |
| SKAU_T00070540 | FAS-ASSOCIATED PROTEIN |
| SKAU_T00070550 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| SKAU_T00070560 | |
| SKAU_T00070570 | BEN DOMAIN-CONTAINING PROTEIN 6 |
| SKAU_T00070580 | GEO07743P1 |
| SKAU_T00070590 | |
| SKAU_T00070600 | TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBER |
| SKAU_T00070610 | EH DOMAIN |
| SKAU_T00070620 | TORSIN |
| SKAU_T00070630 | |
| SKAU_T00070640 | DNA TOPOISOMERASE I |
| SKAU_T00070650 | OXYSTEROL-BINDING PROTEIN-RELATED |
| SKAU_T00070660 | TYROSINE-PROTEIN KINASE |
| SKAU_T00070670 | |
| SKAU_T00070680 | |
| SKAU_T00070690 | STEROL O-ACYLTRANSFERASE |
| SKAU_T00070700 | COLLAGEN ALPHA |
| SKAU_T00070710 | |
| SKAU_T00070720 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
| SKAU_T00070730 | |
| SKAU_T00070740 | CENTROSOME-ASSOCIATED PROTEIN 350 |
| SKAU_T00070750 | QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE |
| SKAU_T00070760 | LIM/HOMEOBOX PROTEIN LHX |
| SKAU_T00070770 | |
| SKAU_T00070780 | |
| SKAU_T00070790 | |
| SKAU_T00070800 | |
| SKAU_T00070810 | |
| SKAU_T00070820 | |
| SKAU_T00070830 | XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED |
| SKAU_T00070840 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
| SKAU_T00070850 | SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG |
| SKAU_T00070860 | UNCHARACTERIZED |
| SKAU_T00070870 | - |
| SKAU_T00070880 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
| SKAU_T00070890 | DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX |
| SKAU_T00070900 | RNA 3' TERMINAL PHOSPHATE CYCLASE |
| SKAU_T00070910 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| SKAU_T00070920 | INTERCELLULAR ADHESION MOLECULE |
| SKAU_T00070930 | |
| SKAU_T00070940 | - |
| SKAU_T00070950 | |
| SKAU_T00070960 | DIPHTHINE SYNTHASE |
| SKAU_T00070970 | |
| SKAU_T00070980 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00070990 | |
| SKAU_T00071000 | AGAP004733-PA |
