Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00068010 | SOLUTE CARRIER FAMILY 35 |
| SKAU_T00068020 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
| SKAU_T00068030 | DYNEIN INTERMEDIATE CHAIN |
| SKAU_T00068040 | ILGF DOMAIN-CONTAINING PROTEIN |
| SKAU_T00068050 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| SKAU_T00068060 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| SKAU_T00068070 | |
| SKAU_T00068080 | |
| SKAU_T00068090 | |
| SKAU_T00068100 | |
| SKAU_T00068110 | CYTOKINE RECEPTOR |
| SKAU_T00068120 | AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED |
| SKAU_T00068130 | NUCLEOTIDE KINASE |
| SKAU_T00068140 | TYROSINE-PROTEIN KINASE HOPSCOTCH |
| SKAU_T00068150 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
| SKAU_T00068160 | |
| SKAU_T00068170 | TYROSINE-PROTEIN KINASE RECEPTOR |
| SKAU_T00068180 | |
| SKAU_T00068190 | |
| SKAU_T00068200 | |
| SKAU_T00068210 | PHOSPHOHEXOMUTASE FAMILY MEMBER |
| SKAU_T00068220 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 7 |
| SKAU_T00068230 | CENTROMERE PROTEIN R |
| SKAU_T00068240 | DOLICHYL GLYCOSYLTRANSFERASE |
| SKAU_T00068250 | FORKHEAD BOX PROTEIN |
| SKAU_T00068260 | |
| SKAU_T00068270 | |
| SKAU_T00068280 | |
| SKAU_T00068290 | |
| SKAU_T00068300 | |
| SKAU_T00068310 | CYSTEINE PROTEASE ATG4 |
| SKAU_T00068320 | DEDICATOR OF CYTOKINESIS DOCK |
| SKAU_T00068330 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| SKAU_T00068340 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| SKAU_T00068350 | |
| SKAU_T00068360 | |
| SKAU_T00068370 | |
| SKAU_T00068380 | KN MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING |
| SKAU_T00068390 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| SKAU_T00068400 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| SKAU_T00068410 | |
| SKAU_T00068420 | |
| SKAU_T00068430 | DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT |
| SKAU_T00068440 | PROTEIN FAM183B |
| SKAU_T00068450 | |
| SKAU_T00068460 | TRANSMEMBRANE PROTEIN 125 |
| SKAU_T00068470 | AP COMPLEX SUBUNIT MU |
| SKAU_T00068480 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 LRRC19 FAMILY MEMBER |
| SKAU_T00068490 | TYROSINE-PROTEIN KINASE RECEPTOR |
| SKAU_T00068500 | CYTOKINE RECEPTOR |
