Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00066010 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
| SKAU_T00066020 | GLYCOGENIN SUBFAMILY MEMBER |
| SKAU_T00066030 | SH2-SH3 ADAPTOR PROTEIN-RELATED |
| SKAU_T00066040 | |
| SKAU_T00066050 | PROTEIN ARGININE N-METHYLTRANSFERASE |
| SKAU_T00066060 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
| SKAU_T00066070 | ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE |
| SKAU_T00066080 | WD40 REPEAT PROTEIN 12, 37 |
| SKAU_T00066090 | EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN |
| SKAU_T00066100 | |
| SKAU_T00066110 | |
| SKAU_T00066120 | |
| SKAU_T00066130 | |
| SKAU_T00066140 | PHOSPHOFRUCTOKINASE |
| SKAU_T00066150 | |
| SKAU_T00066160 | |
| SKAU_T00066170 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00066180 | |
| SKAU_T00066190 | |
| SKAU_T00066200 | |
| SKAU_T00066210 | FRIZZLED |
| SKAU_T00066220 | |
| SKAU_T00066230 | CYCLIN Y, ISOFORM A |
| SKAU_T00066240 | P-SELECTIN GLYCOPROTEIN LIGAND-1 |
| SKAU_T00066250 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| SKAU_T00066260 | CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN B |
| SKAU_T00066270 | CULLIN |
| SKAU_T00066280 | |
| SKAU_T00066290 | |
| SKAU_T00066300 | |
| SKAU_T00066310 | PHOSPHOLIPID SCRAMBLASE-RELATED |
| SKAU_T00066320 | PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER |
| SKAU_T00066330 | |
| SKAU_T00066340 | |
| SKAU_T00066350 | |
| SKAU_T00066360 | |
| SKAU_T00066370 | |
| SKAU_T00066380 | |
| SKAU_T00066390 | GH11358P |
| SKAU_T00066400 | |
| SKAU_T00066410 | SODIUM/HYDROGEN EXCHANGER |
| SKAU_T00066420 | CARBOHYDRATE SULFOTRANSFERASE |
| SKAU_T00066430 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
| SKAU_T00066440 | OVOCHYMASE-RELATED |
| SKAU_T00066450 | RNA PROCESSING PROTEIN LD23810P |
| SKAU_T00066460 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| SKAU_T00066470 | PHOSPHOLIPID SCRAMBLASE-RELATED |
| SKAU_T00066480 | DNA TOPOISOMERASE I |
| SKAU_T00066490 | |
| SKAU_T00066500 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
