Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00074010 | |
| SKAU_T00074020 | |
| SKAU_T00074030 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
| SKAU_T00074040 | PROTEASOME SUBUNIT ALPHA/BETA |
| SKAU_T00074050 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 |
| SKAU_T00074060 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| SKAU_T00074070 | AQUAPORIN TRANSPORTER |
| SKAU_T00074080 | CARBOHYDRATE SULFOTRANSFERASE |
| SKAU_T00074090 | |
| SKAU_T00074100 | CADHERIN-23 |
| SKAU_T00074110 | PROTEIN CBG26694 |
| SKAU_T00074120 | |
| SKAU_T00074130 | CADHERIN-23 |
| SKAU_T00074140 | DESMOGLEIN FAMILY MEMBER |
| SKAU_T00074150 | |
| SKAU_T00074160 | DESMOGLEIN FAMILY MEMBER |
| SKAU_T00074170 | DESMOGLEIN FAMILY MEMBER |
| SKAU_T00074180 | |
| SKAU_T00074190 | URICASE AND TRANSTHYRETIN-RELATED |
| SKAU_T00074200 | BETA-1,4-GALACTOSYLTRANSFERASE |
| SKAU_T00074210 | OPSIN |
| SKAU_T00074220 | TRANSPORT PROTEIN TRAPP |
| SKAU_T00074230 | ZINC FINGER, RING/FYVE/PHD-TYPE |
| SKAU_T00074240 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING |
| SKAU_T00074250 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
| SKAU_T00074260 | |
| SKAU_T00074270 | - |
| SKAU_T00074280 | TBC1 DOMAIN FAMILY MEMBER 7 |
| SKAU_T00074290 | PHOSPHATASE AND ACTIN REGULATOR PHACTR |
| SKAU_T00074300 | SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
| SKAU_T00074310 | ADENYLATE CYCLASE TYPE 1 |
| SKAU_T00074320 | INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN |
| SKAU_T00074330 | INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN |
| SKAU_T00074340 | |
| SKAU_T00074350 | |
| SKAU_T00074360 | |
| SKAU_T00074370 | TENSIN |
| SKAU_T00074380 | |
| SKAU_T00074390 | ENVOPLAKIN |
| SKAU_T00074400 | SOLUTE CARRIER FAMILY 22 MEMBER |
| SKAU_T00074410 | PROTEASOME ASSEMBLY CHAPERONE 4 |
| SKAU_T00074420 | TUBULIN |
| SKAU_T00074430 | VALACYCLOVIR HYDROLASE |
| SKAU_T00074440 | VALACYCLOVIR HYDROLASE |
| SKAU_T00074450 | |
| SKAU_T00074460 | SERINE-THREONINE PROTEIN KINASE |
| SKAU_T00074470 | - |
| SKAU_T00074480 | INTERFERON REGULATORY FACTOR |
| SKAU_T00074490 | EXOCYST COMPLEX COMPONENT SEC5 |
| SKAU_T00074500 |
