About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1494.8153UNCHARACTERIZED
mRNA.BJAM.scaffold1494.8154AXIN
mRNA.BJAM.scaffold1494.8155UNCHARACTERIZED
mRNA.BJAM.scaffold14943.23028
mRNA.BJAM.scaffold14943.23029ACYL-COENZYME A THIOESTERASE-RELATED
mRNA.BJAM.scaffold14947.23030ARRESTIN DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold1495.8156
mRNA.BJAM.scaffold1495.8157
mRNA.BJAM.scaffold1495.8158DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
mRNA.BJAM.scaffold1495.8159MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S22
mRNA.BJAM.scaffold14956.230312-HYDROXYACYL-COA LYASE
mRNA.BJAM.scaffold1496.8160
mRNA.BJAM.scaffold1496.8161SHORT STATURE HOMEOBOX
mRNA.BJAM.scaffold14961.23032SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
mRNA.BJAM.scaffold14961.23033
mRNA.BJAM.scaffold14963.23034RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold14966.23035
mRNA.BJAM.scaffold14968.23036
mRNA.BJAM.scaffold14969.23037VILLIN
mRNA.BJAM.scaffold1498.8162
mRNA.BJAM.scaffold1498.8163
mRNA.BJAM.scaffold1498.8164
mRNA.BJAM.scaffold14987.23038
mRNA.BJAM.scaffold1499.8165
mRNA.BJAM.scaffold1499.8166
mRNA.BJAM.scaffold1499.8167
mRNA.BJAM.scaffold1499.8168DNA-BINDING PROTEIN INHIBITOR
mRNA.BJAM.scaffold14996.23039-
mRNA.BJAM.scaffold14999.23040PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
mRNA.BJAM.scaffold15.93DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold15.94FI24210P1
mRNA.BJAM.scaffold15.95COLLAGEN ALPHA
mRNA.BJAM.scaffold150.1181RING ZINC FINGER PROTEIN
mRNA.BJAM.scaffold150.1182UNCHARACTERIZED
mRNA.BJAM.scaffold150.1183DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE
mRNA.BJAM.scaffold150.1184GLUTATHIONE S-TRANSFERASE
mRNA.BJAM.scaffold150.1185GLUTATHIONE S-TRANSFERASE
mRNA.BJAM.scaffold150.1186GLUTATHIONE S-TRANSFERASE
mRNA.BJAM.scaffold150.1187THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATED
mRNA.BJAM.scaffold150.1188DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN
mRNA.BJAM.scaffold150.1189ZINC FINGER PROTEIN 385B-LIKE
mRNA.BJAM.scaffold150.1190INTEGRIN ALPHA
mRNA.BJAM.scaffold150.1191HIV-1 REV BINDING PROTEIN 2, 3
mRNA.BJAM.scaffold150.1192
mRNA.BJAM.scaffold150.1193KINESIN-LIKE PROTEIN KIF11
mRNA.BJAM.scaffold150.1194TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASE
mRNA.BJAM.scaffold150.1195
mRNA.BJAM.scaffold150.1196
mRNA.BJAM.scaffold150.1197HEXAMETHYLENE BISACETAMIDE INDUCIBLE 1
mRNA.BJAM.scaffold150.1198
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