About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf12380_0.14ATAXIN-3-RELATED
PE_Scaf12380_0.15BTB DOMAIN-CONTAINING PROTEIN
PE_Scaf12380_0.2
PE_Scaf12380_0.5
PE_Scaf12381_3.10DYNEIN HEAVY CHAIN
PE_Scaf12390_0.0
PE_Scaf12390_1.117,8-DIHYDRO-8-OXOGUANINE TRIPHOSPHATASE
PE_Scaf12390_1.5HOMEOBOX PROTEIN MIXL
PE_Scaf12390_1.7CALCIUM HOMEOSTASIS MODULATOR PROTEIN
PE_Scaf12390_2.11
PE_Scaf12390_2.12ALPHA-2-MACROGLOBULIN RECEPTOR-ASSOCIATED PROTEIN
PE_Scaf12390_2.13CENTROMERE PROTEIN M
PE_Scaf12390_2.14PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
PE_Scaf12390_2.15IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED
PE_Scaf12390_2.7COILIN P80
PE_Scaf12390_3.5FROUNT PROTEIN-RELATED
PE_Scaf12390_4.4VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL
PE_Scaf12390_4.5
PE_Scaf12390_5.3GERM CELL-LESS PROTEIN
PE_Scaf12390_5.4SPHINGOMYELIN SYNTHETASE
PE_Scaf12390_6.25ACTIN
PE_Scaf12390_6.3
PE_Scaf12390_7.5RIBONUCLEIC ACID BINDING PROTEIN S1
PE_Scaf12390_8.16CYCLIN
PE_Scaf12390_8.9
PE_Scaf12393_0.3BETA-MANNOSIDASE
PE_Scaf12393_1.2
PE_Scaf12393_1.5ZINC PHOSPHODIESTERASE ELAC PROTEIN 1
PE_Scaf12393_2.27
PE_Scaf12393_2.28
PE_Scaf12393_2.29
PE_Scaf12393_2.30
PE_Scaf12393_2.31
PE_Scaf12393_2.32
PE_Scaf12393_2.33
PE_Scaf12393_2.34
PE_Scaf12393_2.35
PE_Scaf12397_0.3RGD1565685 PROTEIN
PE_Scaf123_2.17CADHERIN-87A
PE_Scaf123_2.7RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN
PE_Scaf123_2.8DNA HELICASE RECQ FAMILY MEMBER
PE_Scaf12400_0.7-
PE_Scaf12401_0.0
PE_Scaf12403_0.0
PE_Scaf12403_0.6
PE_Scaf12403_0.850S RIBOSOMAL PROTEIN L3
PE_Scaf12405_1.2WD REPEAT DOMAIN 60
PE_Scaf12405_1.3SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1
PE_Scaf12406_2.5TRANSPOSON
PE_Scaf12406_2.8
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