About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf12281_0.1
PE_Scaf12282_0.3
PE_Scaf12283_0.0
PE_Scaf12283_0.1
PE_Scaf12285_0.4PROTEIN EVA-1
PE_Scaf12286_2.16
PE_Scaf12286_2.5SYNAPTOTAGMIN
PE_Scaf12286_2.6UNCHARACTERIZED
PE_Scaf12287_0.8TRANSCRIPTION FACTOR GATA FAMILY MEMBER
PE_Scaf12287_1.5TRANSCRIPTION FACTOR GATA FAMILY MEMBER
PE_Scaf12287_1.7TRANSCRIPTION FACTOR GATA FAMILY MEMBER
PE_Scaf12287_1.8
PE_Scaf12287_2.0
PE_Scaf12287_3.9TRANSCRIPTION FACTOR GATA FAMILY MEMBER
PE_Scaf12290_0.0
PE_Scaf12290_0.1
PE_Scaf12294_0.0
PE_Scaf12294_0.1
PE_Scaf12295_0.1
PE_Scaf12296_1.6PROGRAMMED CELL DEATH PROTEIN 7
PE_Scaf12296_1.8
PE_Scaf12296_2.13IMPORTIN-7, 8, 11
PE_Scaf12296_2.14
PE_Scaf12296_2.16
PE_Scaf12296_2.5
PE_Scaf12296_2.7
PE_Scaf12296_3.3ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5
PE_Scaf12296_3.4SH3 DOMAIN-CONTAINING
PE_Scaf12298_1.0
PE_Scaf12298_1.6LYSINE-SPECIFIC DEMETHYLASE
PE_Scaf12299_0.10
PE_Scaf12299_0.11
PE_Scaf12299_0.9
PE_Scaf1229_0.5GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 1
PE_Scaf1229_0.6NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER
PE_Scaf122_0.62-OXO-4-HYDROXY-4-CARBOXY-5-UREIDOIMIDAZOLINE DECARBOXYLASE-RELATED
PE_Scaf12301_0.2WD REPEAT CONTAINING PROTEIN 3 WDR3
PE_Scaf12304_0.2LYSINE-SPECIFIC DEMETHYLASE
PE_Scaf12306_0.1BREAST CANCER METASTASIS-SUPPRESSOR 1
PE_Scaf12307_0.10
PE_Scaf12307_0.6HIGH-AFFINITY CHOLINE TRANSPORTER 1
PE_Scaf12312_0.3PROTEIN CBG12474
PE_Scaf12312_1.2
PE_Scaf12312_1.8
PE_Scaf12312_1.9SORTING NEXIN-22 AND 24
PE_Scaf12312_4.2
PE_Scaf12312_5.0
PE_Scaf12312_5.8NUCLEAR HORMONE RECEPTOR
PE_Scaf12312_7.1RETROTRANSPOSON GAG-LIKE PROTEIN 9
PE_Scaf12312_7.11
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