Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00402010 | ANION EXCHANGE PROTEIN |
| SKAU_T00402020 | T-BOX PROTEIN-RELATED |
| SKAU_T00402030 | |
| SKAU_T00402040 | |
| SKAU_T00402050 | |
| SKAU_T00402060 | |
| SKAU_T00402070 | |
| SKAU_T00402080 | |
| SKAU_T00402090 | INTEGRIN ALPHA |
| SKAU_T00402100 | GOLGIN |
| SKAU_T00402110 | LEUCINE RICH REPEAT IN FLII INTERACTING PROTEIN |
| SKAU_T00402120 | DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL |
| SKAU_T00402130 | |
| SKAU_T00402140 | |
| SKAU_T00402150 | EXPRESSED PROTEIN |
| SKAU_T00402160 | |
| SKAU_T00402170 | CHONDROITIN SULFATE PROTEOGLYCAN 5 -RELATED |
| SKAU_T00402180 | |
| SKAU_T00402190 | |
| SKAU_T00402200 | 50S RIBOSOMAL PROTEIN L3 |
| SKAU_T00402210 | COPINE |
| SKAU_T00402220 | DYNEIN LIGHT INTERMEDIATE CHAIN |
| SKAU_T00402230 | MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN |
| SKAU_T00402240 | |
| SKAU_T00402250 | |
| SKAU_T00402260 | |
| SKAU_T00402270 | SWI/SNF COMPLEX-RELATED |
| SKAU_T00402280 | NON-SPECIFIC LETHAL 1, ISOFORM M |
| SKAU_T00402290 | ASTEROID PROTEIN |
| SKAU_T00402300 | SH3 DOMAIN-BINDING PROTEIN 5 |
| SKAU_T00402310 | |
| SKAU_T00402320 | E3 UBIQUITIN-PROTEIN LIGASE ZNRF1-LIKE PROTEIN |
| SKAU_T00402330 | UNCHARACTERIZED |
| SKAU_T00402340 | |
| SKAU_T00402350 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| SKAU_T00402360 | SMALL NUCLEAR RIBONUCLEOPROTEIN SM |
| SKAU_T00402370 | PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 |
| SKAU_T00402380 | CUB DOMAIN-CONTAINING PROTEIN 1 |
| SKAU_T00402390 | TETRANECTIN-RELATED |
| SKAU_T00402400 | EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN |
| SKAU_T00402410 | PALMITOYLTRANSFERASE ZDHHC16 |
| SKAU_T00402420 | OXYSTEROL-BINDING PROTEIN-RELATED |
| SKAU_T00402430 | DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT |
| SKAU_T00402440 | |
| SKAU_T00402450 | |
| SKAU_T00402460 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| SKAU_T00402470 | |
| SKAU_T00402480 | |
| SKAU_T00402490 | REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN |
| SKAU_T00402500 | FI20236P1 |
