Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00400010 | GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE |
| SKAU_T00400020 | INHIBITOR OF GROWTH PROTEIN |
| SKAU_T00400030 | PROTEIN FAM131B-RELATED |
| SKAU_T00400040 | PROTEIN FAM131B-RELATED |
| SKAU_T00400050 | CHLORIDE CHANNEL PROTEIN 2 |
| SKAU_T00400060 | SOLUTE CARRIER FAMILY 2 |
| SKAU_T00400070 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
| SKAU_T00400080 | ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED |
| SKAU_T00400090 | SERINE/THREONINE-PROTEIN KINASE SBK1 |
| SKAU_T00400100 | EPSIN/ENT-RELATED |
| SKAU_T00400110 | EPITHELIAL MEMBRANE PROTEIN-RELATED |
| SKAU_T00400120 | CALCIUM BINDING PROTEINS |
| SKAU_T00400130 | RNA-BINDING PROTEIN |
| SKAU_T00400140 | CCR4 NOT-RELATED |
| SKAU_T00400150 | CCR4 NOT-RELATED |
| SKAU_T00400160 | PROTEIN SHISA-9-RELATED |
| SKAU_T00400170 | ZINC FINGER PROTEIN |
| SKAU_T00400180 | THYROTROPH EMBRYONIC FACTOR RELATED |
| SKAU_T00400190 | IONOTROPIC GLUTAMATE RECEPTOR |
| SKAU_T00400200 | IONOTROPIC GLUTAMATE RECEPTOR |
| SKAU_T00400210 | VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT |
| SKAU_T00400220 | VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT |
| SKAU_T00400230 | VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA-1 SUBUNIT-RELATED |
| SKAU_T00400240 | BRAIN-SPECIFIC ANGIOGENESIS INHIBITOR 1-ASSOCIATED PROTEIN 2 |
| SKAU_T00400250 | PENTRAXIN |
| SKAU_T00400260 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
| SKAU_T00400270 | |
| SKAU_T00400280 | |
| SKAU_T00400290 | |
| SKAU_T00400300 | IONOTROPIC GLUTAMATE RECEPTOR |
| SKAU_T00400310 | IONOTROPIC GLUTAMATE RECEPTOR |
| SKAU_T00400320 | |
| SKAU_T00400330 | ZNF44 PROTEIN |
| SKAU_T00400340 | GLYCOGEN SYNTHASE KINASE-3 ALPHA |
| SKAU_T00400350 | HMG-BOX TRANSCRIPTION FACTOR BBX |
| SKAU_T00400360 | HMG-BOX TRANSCRIPTION FACTOR BBX |
| SKAU_T00400370 | |
| SKAU_T00400380 | |
| SKAU_T00400390 | ETS |
| SKAU_T00400400 | |
| SKAU_T00400410 | |
| SKAU_T00400420 | |
| SKAU_T00400430 | POU DOMAIN |
| SKAU_T00400440 | |
| SKAU_T00400450 | PRENYLATED RAB ACCEPTOR 1-RELATED |
| SKAU_T00400460 | |
| SKAU_T00400470 | SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA |
| SKAU_T00400480 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| SKAU_T00400490 | NECTIN-2 |
| SKAU_T00400500 |
