Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00401010 | PROTEASOME SUBUNIT ALPHA/BETA |
| SKAU_T00401020 | UNCHARACTERIZED |
| SKAU_T00401030 | AAA DOMAIN-CONTAINING |
| SKAU_T00401040 | ZINC-FINGERS AND HOMEOBOXES RELATED |
| SKAU_T00401050 | DER1-LIKE PROTEIN, DERLIN |
| SKAU_T00401060 | ZINC-FINGERS AND HOMEOBOXES RELATED |
| SKAU_T00401070 | |
| SKAU_T00401080 | HYALURONAN SYNTHASE |
| SKAU_T00401090 | |
| SKAU_T00401100 | COLLAGEN ALPHA |
| SKAU_T00401110 | DEP DOMAIN PROTEIN |
| SKAU_T00401120 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
| SKAU_T00401130 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER |
| SKAU_T00401140 | LEUCINE-RICH REPEAT, ISOFORM F-RELATED |
| SKAU_T00401150 | CALBINDIN |
| SKAU_T00401160 | ACTIN BUNDLING/MISSING IN METASTASIS-RELATED |
| SKAU_T00401170 | NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT |
| SKAU_T00401180 | TATD FAMILY DEOXYRIBONUCLEASE |
| SKAU_T00401190 | RING ZINC FINGER PROTEIN |
| SKAU_T00401200 | TRANSMEMBRANE PROTEIN 65 |
| SKAU_T00401210 | COLLAGEN ALPHA |
| SKAU_T00401220 | SERUM RESPONSE FACTOR-BINDING |
| SKAU_T00401230 | TRANSCRIPTION FACTOR E2F |
| SKAU_T00401240 | |
| SKAU_T00401250 | |
| SKAU_T00401260 | |
| SKAU_T00401270 | |
| SKAU_T00401280 | |
| SKAU_T00401290 | |
| SKAU_T00401300 | |
| SKAU_T00401310 | |
| SKAU_T00401320 | |
| SKAU_T00401330 | |
| SKAU_T00401340 | |
| SKAU_T00401350 | |
| SKAU_T00401360 | |
| SKAU_T00401370 | |
| SKAU_T00401380 | |
| SKAU_T00401390 | |
| SKAU_T00401400 | SOX TRANSCRIPTION FACTOR |
| SKAU_T00401410 | |
| SKAU_T00401420 | |
| SKAU_T00401430 | |
| SKAU_T00401440 | |
| SKAU_T00401450 | |
| SKAU_T00401460 | NEURENSIN 1-RELATED |
| SKAU_T00401470 | PHOSPHOLIPID ACYLTRANSFERASE |
| SKAU_T00401480 | 39S RIBOSOMAL PROTEIN L36, MITOCHONDRIAL |
| SKAU_T00401490 | NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNIT |
| SKAU_T00401500 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
