Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00362510 | GLUTAMINE SYNTHETASE |
| SKAU_T00362520 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
| SKAU_T00362530 | JANUS-A/JANUS-B |
| SKAU_T00362540 | ADENOSINE/GUANOSINE DIPHOSPHATASE |
| SKAU_T00362550 | PROTEIN CBG26694 |
| SKAU_T00362560 | |
| SKAU_T00362570 | PA-PL1 PHOSPHOLIPASE FAMILY |
| SKAU_T00362580 | SET DOMAIN PROTEINS |
| SKAU_T00362590 | LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN |
| SKAU_T00362600 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00362610 | RASSF |
| SKAU_T00362620 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
| SKAU_T00362630 | CALCIUM BINDING PROTEINS |
| SKAU_T00362640 | PROLIFERATING CELL NUCLEAR ANTIGEN |
| SKAU_T00362650 | PROTEIN CBG26694 |
| SKAU_T00362660 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING |
| SKAU_T00362670 | CELL DIVISION CYCLE AND APOPTOSIS REGULATOR PROTEIN |
| SKAU_T00362680 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| SKAU_T00362690 | NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1 |
| SKAU_T00362700 | |
| SKAU_T00362710 | SYNAPTOBREVIN HOMOLOG YKT6 |
| SKAU_T00362720 | SYNAPTOBREVIN HOMOLOG YKT6 |
| SKAU_T00362730 | HEXOKINASE |
| SKAU_T00362740 | PROTEASE M14 CARBOXYPEPTIDASE |
| SKAU_T00362750 | HOMEOBOX PROTEIN EMX-RELATED |
| SKAU_T00362760 | SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 |
| SKAU_T00362770 | G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE |
| SKAU_T00362780 | LSM1 |
| SKAU_T00362790 | AGAP008228-PA |
| SKAU_T00362800 | RING ZINC FINGER PROTEIN |
| SKAU_T00362810 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| SKAU_T00362820 | ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN |
| SKAU_T00362830 | |
| SKAU_T00362840 | POLY ADP-RIBOSE GLYCOHYDROLASE |
| SKAU_T00362850 | POLY ADP-RIBOSE GLYCOHYDROLASE |
| SKAU_T00362860 | 2-OXOGLUTARATE DEHYDROGENASE |
| SKAU_T00362870 | |
| SKAU_T00362880 | SERINE/THREONINE-PROTEIN KINASE |
| SKAU_T00362890 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| SKAU_T00362900 | DNA POLYMERASE TYPE-X FAMILY MEMBER |
| SKAU_T00362910 | HEPARAN SULFATE SULFOTRANSFERASE |
| SKAU_T00362920 | MOTOR NEURON AND PANCREAS HOMEOBOX PROTEIN |
| SKAU_T00362930 | HISTONE H2A |
| SKAU_T00362940 | PUR-TRANSCRIPTIONAL ACTIVATOR |
| SKAU_T00362950 | |
| SKAU_T00362960 | INTERLEUKIN-1 FAMILY MEMBER |
| SKAU_T00362970 | |
| SKAU_T00362980 | INTERLEUKIN-1 FAMILY MEMBER |
| SKAU_T00362990 | METAL TRANSPORTER CNNM |
| SKAU_T00363000 | METAL TRANSPORTER CNNM |
