Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00362010 | ENDONUCLEASE-RELATED |
| SKAU_T00362020 | |
| SKAU_T00362030 | DUF614 FAMILY PROTEIN-RELATED |
| SKAU_T00362040 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 |
| SKAU_T00362050 | TESMIN/TSO1-RELATED |
| SKAU_T00362060 | |
| SKAU_T00362070 | RAS GTPASE-RELATED |
| SKAU_T00362080 | TNF RECEPTOR ASSOCIATED FACTOR |
| SKAU_T00362090 | TENASCIN |
| SKAU_T00362100 | LIM DOMAIN KINASE 1 |
| SKAU_T00362110 | NMDA RECEPTOR SYNAPTONUCLEAR SIGNALING AND NEURONAL MIGRATION FACTOR |
| SKAU_T00362120 | NMDA RECEPTOR SYNAPTONUCLEAR SIGNALING AND NEURONAL MIGRATION FACTOR |
| SKAU_T00362130 | NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER |
| SKAU_T00362140 | CHLORIDE INTRACELLULAR CHANNEL PROTEIN 6-RELATED |
| SKAU_T00362150 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
| SKAU_T00362160 | POU DOMAIN |
| SKAU_T00362170 | |
| SKAU_T00362180 | NEURAL PROLIFERATION DIFFERENTIATION AND CONTROL PROTEIN-1 NPDC-1 PROTEIN |
| SKAU_T00362190 | TYROSINE-PROTEIN KINASE RECEPTOR |
| SKAU_T00362200 | |
| SKAU_T00362210 | |
| SKAU_T00362220 | |
| SKAU_T00362230 | ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 |
| SKAU_T00362240 | SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS |
| SKAU_T00362250 | NIBAN FAMILY MEMBER |
| SKAU_T00362260 | ZONA PELLUCIDA SPERM-BINDING PROTEIN 3 |
| SKAU_T00362270 | VESICLE PROTEIN SORTING-ASSOCIATED |
| SKAU_T00362280 | AKNA DOMAIN-CONTAINING PROTEIN |
| SKAU_T00362290 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| SKAU_T00362300 | |
| SKAU_T00362310 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| SKAU_T00362320 | MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED |
| SKAU_T00362330 | COLLAGEN ALPHA |
| SKAU_T00362340 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
| SKAU_T00362350 | |
| SKAU_T00362360 | ZONA PELLUCIDA SPERM-BINDING PROTEIN 3 |
| SKAU_T00362370 | ZONA PELLUCIDA SPERM-BINDING PROTEIN 3 |
| SKAU_T00362380 | ZONA PELLUCIDA SPERM-BINDING PROTEIN 3 |
| SKAU_T00362390 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
| SKAU_T00362400 | |
| SKAU_T00362410 | |
| SKAU_T00362420 | G9A, ISOFORM B |
| SKAU_T00362430 | ARRESTIN DOMAIN CONTAINING PROTEIN |
| SKAU_T00362440 | |
| SKAU_T00362450 | |
| SKAU_T00362460 | |
| SKAU_T00362470 | |
| SKAU_T00362480 | |
| SKAU_T00362490 | |
| SKAU_T00362500 |
