Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00350010 | TRANSMEMBRANE PROTEIN 2-RELATED |
| SKAU_T00350020 | MESODERM DEVELOPMENT CANDIDATE 2 |
| SKAU_T00350030 | TALIN ROD DOMAIN-CONTAINING PROTEIN 1 |
| SKAU_T00350040 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 161 |
| SKAU_T00350050 | PRO-INTERLEUKIN-16 |
| SKAU_T00350060 | TRANSMEMBRANE CHANNEL-RELATED |
| SKAU_T00350070 | |
| SKAU_T00350080 | RING FINGER AND KH DOMAIN CONTAINING PROTEIN 1 |
| SKAU_T00350090 | TRANSLATION ELONGATION FACTOR-RELATED |
| SKAU_T00350100 | TRANSLATION ELONGATION FACTOR-RELATED |
| SKAU_T00350110 | STABILIZER OF AXONEMAL MICROTUBULES 2 |
| SKAU_T00350120 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| SKAU_T00350130 | LAMIN DM0-RELATED |
| SKAU_T00350140 | E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER |
| SKAU_T00350150 | |
| SKAU_T00350160 | CONNEXIN |
| SKAU_T00350170 | SH3 DOMAIN-CONTAINING |
| SKAU_T00350180 | |
| SKAU_T00350190 | DISCONNECTED-RELATED |
| SKAU_T00350200 | HEPATOMA-DERIVED GROWTH FACTOR-RELATED |
| SKAU_T00350210 | |
| SKAU_T00350220 | DED DOMAIN-CONTAINING PROTEIN |
| SKAU_T00350230 | HOMER |
| SKAU_T00350240 | P300 TRANSCRIPTIONAL COFACTOR JMY-RELATED |
| SKAU_T00350250 | P300 TRANSCRIPTIONAL COFACTOR JMY-RELATED |
| SKAU_T00350260 | BLOM7 |
| SKAU_T00350270 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| SKAU_T00350280 | GLYCINE AMIDINOTRANSFERASE, MITOCHONDRIAL |
| SKAU_T00350290 | GLYCINE AMIDINOTRANSFERASE, MITOCHONDRIAL |
| SKAU_T00350300 | LONG-CHAIN FATTY ACID TRANSPORT PROTEIN |
| SKAU_T00350310 | LONG-CHAIN FATTY ACID TRANSPORT PROTEIN |
| SKAU_T00350320 | ANKYRIN REPEAT PROTEIN |
| SKAU_T00350330 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| SKAU_T00350340 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| SKAU_T00350350 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| SKAU_T00350360 | SIGNAL PEPTIDE PEPTIDASE |
| SKAU_T00350370 | URIDINE KINASE |
| SKAU_T00350380 | BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 6 |
| SKAU_T00350390 | CATION EFFLUX PROTEIN/ ZINC TRANSPORTER |
| SKAU_T00350400 | AAA-FAMILY ATPASE |
| SKAU_T00350410 | NAD(P) TRANSHYDROGENASE |
| SKAU_T00350420 | NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1 |
| SKAU_T00350430 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| SKAU_T00350440 | FIBROBLAST GROWTH FACTOR |
| SKAU_T00350450 | |
| SKAU_T00350460 | MEVALONATE KINASE/GALACTOKINASE |
| SKAU_T00350470 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 |
| SKAU_T00350480 | GH01354P |
| SKAU_T00350490 | SHC TRANSFORMING PROTEIN |
| SKAU_T00350500 | LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN |
