Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00347510 | |
| SKAU_T00347520 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| SKAU_T00347530 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| SKAU_T00347540 | - |
| SKAU_T00347550 | PHD AND RING FINGER DOMAIN-CONTAINING PROTEIN 1 |
| SKAU_T00347560 | |
| SKAU_T00347570 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| SKAU_T00347580 | TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED |
| SKAU_T00347590 | L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+)) |
| SKAU_T00347600 | |
| SKAU_T00347610 | 5-HYDROXYTRYPTAMINE RECEPTOR |
| SKAU_T00347620 | CYTOCHROME B5 |
| SKAU_T00347630 | DIABETES AND OBESITY REGULATED, ISOFORM G |
| SKAU_T00347640 | NAZO FAMILY MEMBER |
| SKAU_T00347650 | SERINE/THREONINE-PROTEIN KINASE |
| SKAU_T00347660 | ORIGIN RECOGNITION COMPLEX SUBUNIT 6 |
| SKAU_T00347670 | VACUOLAR SORTING PROTEIN 35 |
| SKAU_T00347680 | 5-HYDROXYTRYPTAMINE RECEPTOR |
| SKAU_T00347690 | |
| SKAU_T00347700 | |
| SKAU_T00347710 | CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL |
| SKAU_T00347720 | |
| SKAU_T00347730 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY F MEMBER 2-RELATED |
| SKAU_T00347740 | UPF0547 PROTEIN C16ORF87 |
| SKAU_T00347750 | ALANINE AMINOTRANSFERASE |
| SKAU_T00347760 | AUSTRALIN, ISOFORM A-RELATED |
| SKAU_T00347770 | DNAJ-LIKE-2, ISOFORM A-RELATED |
| SKAU_T00347780 | DNAJ-LIKE-2, ISOFORM A-RELATED |
| SKAU_T00347790 | OVOCHYMASE-RELATED |
| SKAU_T00347800 | T-CELL IMMUNOMODULATORY PROTEIN HOMOLOG |
| SKAU_T00347810 | |
| SKAU_T00347820 | |
| SKAU_T00347830 | |
| SKAU_T00347840 | T-CELL IMMUNOMODULATORY PROTEIN HOMOLOG |
| SKAU_T00347850 | PHOSPHORYLASE B KINASE REGULATORY SUBUNIT |
| SKAU_T00347860 | ATP-DEPENDENT RNA HELICASE |
| SKAU_T00347870 | |
| SKAU_T00347880 | NEUROPHYSIN |
| SKAU_T00347890 | THREONINE SYNTHASE FAMILY MEMBER |
| SKAU_T00347900 | |
| SKAU_T00347910 | HISTONE-LYSINE N-METHYLTRANSFERASE SMYD |
| SKAU_T00347920 | HOMEOBOX PROTEIN ARISTALESS |
| SKAU_T00347930 | |
| SKAU_T00347940 | |
| SKAU_T00347950 | |
| SKAU_T00347960 | |
| SKAU_T00347970 | TETRASPANIN |
| SKAU_T00347980 | |
| SKAU_T00347990 | |
| SKAU_T00348000 |
