About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g13058MYOCARDIN-RELATED TRANSCRIPTION FACTOR-RELATED
Chiridota_g13059
Chiridota_g1306TYROSINE-PROTEIN KINASE
Chiridota_g13060
Chiridota_g13061
Chiridota_g13062
Chiridota_g13063
Chiridota_g13064UBIQUITIN-CONJUGATING ENZYME E2
Chiridota_g13065FRINGE-RELATED
Chiridota_g13066DYNEIN HEAVY CHAIN
Chiridota_g13067
Chiridota_g13068
Chiridota_g13069LP21163P
Chiridota_g1307PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE
Chiridota_g13070GLUTAMATE-RICH WD REPEAT-CONTAINING PROTEIN 1
Chiridota_g13071MELANOCYTE PROTEIN PMEL 17-RELATED
Chiridota_g13072BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Chiridota_g13073
Chiridota_g13074
Chiridota_g13075BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Chiridota_g13076
Chiridota_g13077
Chiridota_g13078
Chiridota_g13079PROTEIN CBG26694
Chiridota_g1308
Chiridota_g13080ENDONUCLEASE-RELATED
Chiridota_g1308160S RIBOSOMAL PROTEIN L38
Chiridota_g13082
Chiridota_g13083AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A
Chiridota_g13084
Chiridota_g13085
Chiridota_g13086
Chiridota_g13087
Chiridota_g13088
Chiridota_g13089GUANYLYL CYCLASE
Chiridota_g1309
Chiridota_g13090
Chiridota_g13091NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
Chiridota_g13092GUANYLYL CYCLASE
Chiridota_g13093GABA-B RECEPTOR
Chiridota_g13094
Chiridota_g13095
Chiridota_g13096
Chiridota_g13097
Chiridota_g13098
Chiridota_g13099
Chiridota_g131-
Chiridota_g1310VACUOLAR PROTEIN SORTING VPS16
Chiridota_g13100
Chiridota_g13101FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE
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