About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g13012FORMIMINOTRANSFERASE-CYCLODEAMINASE
Chiridota_g13013NUCLEAR DISTRIBUTION PROTEIN NUDE HOMOLOG 1
Chiridota_g13014ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Chiridota_g13015
Chiridota_g13016
Chiridota_g13017
Chiridota_g13018ZGC:195170
Chiridota_g13019
Chiridota_g1302
Chiridota_g13020UNCHARACTERIZED
Chiridota_g13021RIBOSOMAL PROTEIN S7
Chiridota_g13022CASEIN KINASE-RELATED
Chiridota_g13023PERIAXIN-LIKE
Chiridota_g13024
Chiridota_g13025SPERIOLIN-BINDING FACTOR
Chiridota_g13026REVERSE TRANSCRIPTASES
Chiridota_g13027
Chiridota_g13028RNA-BINDING PROTEIN LUC7-RELATED
Chiridota_g13029
Chiridota_g1303-
Chiridota_g13030
Chiridota_g13031ATP-DEPENDENT RNA HELICASE
Chiridota_g13032PROTEIN CBG12474
Chiridota_g13033RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Chiridota_g13034SULFOTRANSFERASE SULT
Chiridota_g13035
Chiridota_g13036
Chiridota_g13037
Chiridota_g13038INACTIVE TYROSINE-PROTEIN KINASE 7
Chiridota_g13039
Chiridota_g1304INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Chiridota_g13040RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Chiridota_g13041
Chiridota_g13042
Chiridota_g13043
Chiridota_g13044ZINC FINGER PROTEIN
Chiridota_g13045
Chiridota_g13046ZINC FINGER PROTEIN ZIC AND GLI
Chiridota_g13047TIRAP
Chiridota_g13048ALPHA-L-FUCOSIDASE
Chiridota_g13049MEVALONATE KINASE/GALACTOKINASE
Chiridota_g1305
Chiridota_g13050METALLOPROTEASE
Chiridota_g13051SULFURTRANSFERASE-RELATED
Chiridota_g13052TEX2 PROTEIN-RELATED
Chiridota_g13053
Chiridota_g13054RIBONUCLEIC ACID BINDING PROTEIN S1
Chiridota_g13055PROTEIN PHOSPHATASE 2C
Chiridota_g13056
Chiridota_g13057RP42 RELATED
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