About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g12789
Chiridota_g1279
Chiridota_g12790
Chiridota_g12791
Chiridota_g12792
Chiridota_g12793
Chiridota_g12794MOLTING PROTEIN MLT-4
Chiridota_g12795CALCIUM-INDEPENDENT PHOSPHOLIPASE A2
Chiridota_g12796CALCIUM-INDEPENDENT PHOSPHOLIPASE A2
Chiridota_g12797OPSIN
Chiridota_g12798OPSIN
Chiridota_g12799NOTCH LIGAND FAMILY MEMBER
Chiridota_g12860S RIBOSOMAL PROTEIN L18A
Chiridota_g1280
Chiridota_g12800UNCHARACTERIZED
Chiridota_g12801ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Chiridota_g12802
Chiridota_g12803ZINC FINGER PROTEIN 200
Chiridota_g12804
Chiridota_g12805ZINC FINGER PROTEIN
Chiridota_g12806
Chiridota_g12807
Chiridota_g12808
Chiridota_g12809GLYCINE-RICH RNA-BINDING PROTEIN RZ1A
Chiridota_g1281HOMEO BOX HB9 LIKE A-RELATED
Chiridota_g12810
Chiridota_g12811
Chiridota_g12812
Chiridota_g12813
Chiridota_g12814
Chiridota_g12815
Chiridota_g12816
Chiridota_g12817
Chiridota_g12818PLECKSTRIN HOMOLOGY PH DOMAIN-CONTAINING PROTEIN
Chiridota_g12819LD44762P
Chiridota_g1282
Chiridota_g12820EUKARYOTIC TRANSLATION INITIATION FACTOR 3
Chiridota_g12821SULFOTRANSFERASE SULT
Chiridota_g12822
Chiridota_g12823SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Chiridota_g12824ACYL-MALONYL CONDENSING ENZYME-RELATED
Chiridota_g12825
Chiridota_g12826
Chiridota_g12827
Chiridota_g12828
Chiridota_g12829
Chiridota_g1283
Chiridota_g12830
Chiridota_g12831
Chiridota_g12832METHYLTRANSFERASE-RELATED
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