Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00340010 | |
| SKAU_T00340020 | |
| SKAU_T00340030 | |
| SKAU_T00340040 | |
| SKAU_T00340050 | |
| SKAU_T00340060 | BRG-1 ASSOCIATED FACTOR 250 BAF250 |
| SKAU_T00340070 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| SKAU_T00340080 | |
| SKAU_T00340090 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00340100 | TRANSCRIPTION FACTOR CP2 |
| SKAU_T00340110 | |
| SKAU_T00340120 | 14-3-3 PROTEIN |
| SKAU_T00340130 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
| SKAU_T00340140 | ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 |
| SKAU_T00340150 | ASAP FAMILY MEMBER |
| SKAU_T00340160 | PORCUPINE |
| SKAU_T00340170 | CHONDROLECTIN VARIANT CHODLFDELTAE. |
| SKAU_T00340180 | |
| SKAU_T00340190 | |
| SKAU_T00340200 | PROTEIN TRANSPORT PROTEIN SEC23 |
| SKAU_T00340210 | OPSIN |
| SKAU_T00340220 | SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54 |
| SKAU_T00340230 | SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54 |
| SKAU_T00340240 | |
| SKAU_T00340250 | ARSENITE METHYLTRANSFERASE |
| SKAU_T00340260 | TUBULIN |
| SKAU_T00340270 | BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 1A |
| SKAU_T00340280 | COFILIN-RELATED |
| SKAU_T00340290 | |
| SKAU_T00340300 | SORTING NEXIN FAMILY MEMBER |
| SKAU_T00340310 | UNCHARACTERIZED |
| SKAU_T00340320 | EGL NINE HOMOLOG-RELATED |
| SKAU_T00340330 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
| SKAU_T00340340 | |
| SKAU_T00340350 | RUNT RELATED |
| SKAU_T00340360 | TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED |
| SKAU_T00340370 | |
| SKAU_T00340380 | |
| SKAU_T00340390 | CELL DIVISION CYCLE 5-LIKE PROTEIN |
| SKAU_T00340400 | WD REPEAT AND COILED-COIL-CONTAINING PROTEIN |
| SKAU_T00340410 | KELCH PROTEIN |
| SKAU_T00340420 | SER/THR PROTEIN KINASE-TRB |
| SKAU_T00340430 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
| SKAU_T00340440 | CDP-DIACYLGLYCEROL--GLYCEROL-3-PHOSPHATE 3-PHOSPHATIDYLTRANSFERASE-RELATED |
| SKAU_T00340450 | |
| SKAU_T00340460 | UNCHARACTERIZED |
| SKAU_T00340470 | TGF-BETA FAMILY |
| SKAU_T00340480 | TGF-BETA FAMILY |
| SKAU_T00340490 | |
| SKAU_T00340500 |
