Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00338010 | PIRNA BIOGENESIS PROTEIN EXD1 |
| SKAU_T00338020 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| SKAU_T00338030 | |
| SKAU_T00338040 | G PATCH DOMAIN CONTAINING PROTEIN 2 |
| SKAU_T00338050 | |
| SKAU_T00338060 | |
| SKAU_T00338070 | |
| SKAU_T00338080 | |
| SKAU_T00338090 | |
| SKAU_T00338100 | |
| SKAU_T00338110 | KNIRPS-RELATED PROTEIN-RELATED |
| SKAU_T00338120 | |
| SKAU_T00338130 | |
| SKAU_T00338140 | |
| SKAU_T00338150 | |
| SKAU_T00338160 | |
| SKAU_T00338170 | |
| SKAU_T00338180 | HOMEOBOX PROTEIN PROSPERO/PROX-1/CEH-26 |
| SKAU_T00338190 | DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED |
| SKAU_T00338200 | RIBOSOMAL PROTEIN S6 KINASE |
| SKAU_T00338210 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| SKAU_T00338220 | |
| SKAU_T00338230 | OLFACTOMEDIN-RELATED |
| SKAU_T00338240 | LEUCINE RICH REPEAT FAMILY PROTEIN |
| SKAU_T00338250 | CARBON CATABOLITE REPRESSOR PROTEIN 4 |
| SKAU_T00338260 | VASOHIBIN-1-LIKE ISOFORM X2 |
| SKAU_T00338270 | UNCHARACTERIZED |
| SKAU_T00338280 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| SKAU_T00338290 | |
| SKAU_T00338300 | |
| SKAU_T00338310 | VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN |
| SKAU_T00338320 | |
| SKAU_T00338330 | |
| SKAU_T00338340 | |
| SKAU_T00338350 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00338360 | DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE |
| SKAU_T00338370 | LIN52 FAMILY MEMBER |
| SKAU_T00338380 | VISUAL SYSTEM HOMEOBOX 2 |
| SKAU_T00338390 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| SKAU_T00338400 | |
| SKAU_T00338410 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| SKAU_T00338420 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| SKAU_T00338430 | VERTNIN |
| SKAU_T00338440 | |
| SKAU_T00338450 | |
| SKAU_T00338460 | UPF0338 PROTEIN |
| SKAU_T00338470 | G PATCH DOMAIN CONTAINING PROTEIN 2 |
| SKAU_T00338480 | |
| SKAU_T00338490 | INTRAFLAGELLAR TRANSPORT PROTEIN 43 HOMOLOG |
| SKAU_T00338500 | TGF-BETA FAMILY |
