Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00301510 | |
| SKAU_T00301520 | T-CELL RECEPTOR ALPHA CHAIN V REGION-RELATED |
| SKAU_T00301530 | RETINAL CONE RHODOPSIN-SENSITIVE CGMP 3',5'-CYCLIC PHOSPHODIESTERASE GAMMA-SUBUNIT-RELATED |
| SKAU_T00301540 | |
| SKAU_T00301550 | MHC CLASS II-RELATED |
| SKAU_T00301560 | |
| SKAU_T00301570 | |
| SKAU_T00301580 | T-CELL RECEPTOR ALPHA CHAIN V REGION-RELATED |
| SKAU_T00301590 | T-CELL RECEPTOR GAMMA CHAIN |
| SKAU_T00301600 | MHC CLASS II-RELATED |
| SKAU_T00301610 | MHC CLASS II-RELATED |
| SKAU_T00301620 | |
| SKAU_T00301630 | T-CELL RECEPTOR ALPHA CHAIN V REGION-RELATED |
| SKAU_T00301640 | T-CELL RECEPTOR ALPHA CHAIN V REGION-RELATED |
| SKAU_T00301650 | T-CELL RECEPTOR ALPHA CHAIN V REGION-RELATED |
| SKAU_T00301660 | |
| SKAU_T00301670 | MHC CLASS II-RELATED |
| SKAU_T00301680 | |
| SKAU_T00301690 | |
| SKAU_T00301700 | SI:CH211-196P9.1-RELATED |
| SKAU_T00301710 | |
| SKAU_T00301720 | |
| SKAU_T00301730 | |
| SKAU_T00301740 | NOTUM-RELATED |
| SKAU_T00301750 | MYELOID-ASSOCIATED DIFFERENTIATION MARKER MYADM FAMILY MEMBER |
| SKAU_T00301760 | PYRROLINE-5-CARBOXYLATE REDUCTASE |
| SKAU_T00301770 | TRANSCRIPTION FACTOR MAF |
| SKAU_T00301780 | NEUROPEPTIDE B |
| SKAU_T00301790 | SULFATE TRANSPORTER |
| SKAU_T00301800 | UNCHARACTERIZED |
| SKAU_T00301810 | UNCHARACTERIZED |
| SKAU_T00301820 | UNCHARACTERIZED |
| SKAU_T00301830 | UNCHARACTERIZED |
| SKAU_T00301840 | UNCHARACTERIZED |
| SKAU_T00301850 | UNCHARACTERIZED |
| SKAU_T00301860 | UNCHARACTERIZED |
| SKAU_T00301870 | |
| SKAU_T00301880 | |
| SKAU_T00301890 | |
| SKAU_T00301900 | PIKACHURIN-LIKE PROTEIN |
| SKAU_T00301910 | |
| SKAU_T00301920 | |
| SKAU_T00301930 | |
| SKAU_T00301940 | |
| SKAU_T00301950 | |
| SKAU_T00301960 | |
| SKAU_T00301970 | |
| SKAU_T00301980 | |
| SKAU_T00301990 | SOX100B |
| SKAU_T00302000 |
