Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00300010 | |
| SKAU_T00300020 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00300030 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00300040 | |
| SKAU_T00300050 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00300060 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00300070 | TFIIF-ALPHA |
| SKAU_T00300080 | |
| SKAU_T00300090 | |
| SKAU_T00300100 | |
| SKAU_T00300110 | |
| SKAU_T00300120 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
| SKAU_T00300130 | AGAP004733-PA |
| SKAU_T00300140 | AGAP004733-PA |
| SKAU_T00300150 | ALDEHYDE DEHYDROGENASE |
| SKAU_T00300160 | ALDEHYDE DEHYDROGENASE |
| SKAU_T00300170 | ALDEHYDE DEHYDROGENASE |
| SKAU_T00300180 | ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT |
| SKAU_T00300190 | GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNIT |
| SKAU_T00300200 | PROTEIN ARGININE N-METHYLTRANSFERASE |
| SKAU_T00300210 | UNCHARACTERIZED |
| SKAU_T00300220 | UNCHARACTERIZED |
| SKAU_T00300230 | |
| SKAU_T00300240 | UNCHARACTERIZED |
| SKAU_T00300250 | |
| SKAU_T00300260 | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE |
| SKAU_T00300270 | |
| SKAU_T00300280 | EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN |
| SKAU_T00300290 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
| SKAU_T00300300 | |
| SKAU_T00300310 | RFX TRANSCRIPTION FACTOR FAMILY |
| SKAU_T00300320 | |
| SKAU_T00300330 | |
| SKAU_T00300340 | RETROTRANSPOSON |
| SKAU_T00300350 | |
| SKAU_T00300360 | ILGF DOMAIN-CONTAINING PROTEIN |
| SKAU_T00300370 | INTERLEUKIN-27 SUBUNIT BETA |
| SKAU_T00300380 | IMPORTIN BETA |
| SKAU_T00300390 | |
| SKAU_T00300400 | |
| SKAU_T00300410 | DEOXYHYPUSINE SYNTHASE |
| SKAU_T00300420 | |
| SKAU_T00300430 | PDZ DOMAIN CONTAINING PROTEIN |
| SKAU_T00300440 | |
| SKAU_T00300450 | |
| SKAU_T00300460 | |
| SKAU_T00300470 | |
| SKAU_T00300480 | SYNAPTOGYRIN |
| SKAU_T00300490 | |
| SKAU_T00300500 | AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C |
