Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00299010 | |
| SKAU_T00299020 | |
| SKAU_T00299030 | PHOSPHOMANNOMUTASE |
| SKAU_T00299040 | CALCIUM-REGULATED HEAT STABLE PROTEIN CRHSP-24-RELATED |
| SKAU_T00299050 | DNA-DIRECTED RNA POLYMERASE II, III |
| SKAU_T00299060 | ACONITATE HYDRATASE B |
| SKAU_T00299070 | TRANSDUCER OF ERBB2 TOB |
| SKAU_T00299080 | THYROTROPH EMBRYONIC FACTOR RELATED |
| SKAU_T00299090 | MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7 |
| SKAU_T00299100 | RAN GTPASE-ACTIVATING PROTEIN 1 |
| SKAU_T00299110 | |
| SKAU_T00299120 | RING BOX |
| SKAU_T00299130 | HSC70-INTERACTING PROTEIN |
| SKAU_T00299140 | XAA-PRO AMINOPEPTIDASE 3 |
| SKAU_T00299150 | CBP/P300-RELATED |
| SKAU_T00299160 | CHROMOBOX PROTEIN HOMOLOG 7 |
| SKAU_T00299170 | JOSEPHIN 1, 2 |
| SKAU_T00299180 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| SKAU_T00299190 | DESUMOYLATING ISOPEPTIDASE |
| SKAU_T00299200 | PROTEIN SHISA-9-RELATED |
| SKAU_T00299210 | MYOCARDIN-RELATED TRANSCRIPTION FACTOR-RELATED |
| SKAU_T00299220 | |
| SKAU_T00299230 | PEROXISOMAL MEMBRANE PROTEIN PMP34-RELATED |
| SKAU_T00299240 | |
| SKAU_T00299250 | NUCLEAR BODY PROTEIN SP140 |
| SKAU_T00299260 | NUCLEAR BODY PROTEIN SP140 |
| SKAU_T00299270 | NUCLEAR BODY PROTEIN SP140 |
| SKAU_T00299280 | DENTIN MATRIX PROTEIN 4 PROTEIN FAM20 |
| SKAU_T00299290 | PENTRAXIN |
| SKAU_T00299300 | |
| SKAU_T00299310 | POLYCOMB GROUP PROTEIN PC |
| SKAU_T00299320 | BRAIN-SPECIFIC ANGIOGENESIS INHIBITOR 1-ASSOCIATED PROTEIN 2 |
| SKAU_T00299330 | PARVALBUMIN ALPHA |
| SKAU_T00299340 | ACTIVATING TRANSCRIPTION FACTOR ATF 4/5 |
| SKAU_T00299350 | APOLIPOPROTEIN L |
| SKAU_T00299360 | BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED |
| SKAU_T00299370 | MITOCHONDRIAL DYNAMICS PROTEINS 49/51 FAMILY MEMBER |
| SKAU_T00299380 | L-ASPARAGINASE |
| SKAU_T00299390 | |
| SKAU_T00299400 | THIOSULFATE SULFERTANSFERASE |
| SKAU_T00299410 | CBP/P300-RELATED |
| SKAU_T00299420 | CYTOKINE RECEPTOR |
| SKAU_T00299430 | CYTOKINE RECEPTOR |
| SKAU_T00299440 | |
| SKAU_T00299450 | CEREBELLIN-RELATED |
| SKAU_T00299460 | BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE |
| SKAU_T00299470 | |
| SKAU_T00299480 | PROTEIN PHOSPHATASE 2C |
| SKAU_T00299490 | |
| SKAU_T00299500 |
