About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf11549_0.1
PE_Scaf1154_0.3POLY [ADP-RIBOSE] POLYMERASE
PE_Scaf11550_0.7THAP DOMAIN PROTEIN
PE_Scaf11553_0.0
PE_Scaf11553_0.1INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
PE_Scaf11554_0.1BITESIZE, ISOFORM I
PE_Scaf11555_0.1
PE_Scaf11559_0.10
PE_Scaf11559_0.11
PE_Scaf11559_0.2
PE_Scaf11559_0.3
PE_Scaf11559_0.4
PE_Scaf11559_0.5
PE_Scaf11562_0.2
PE_Scaf11562_1.2SPERMATOGENESIS-ASSOCIATED SERINE-RICH PROTEIN 2-RELATED
PE_Scaf11563_1.10PDZ AND LIM DOMAIN PROTEIN ZASP
PE_Scaf11563_1.11
PE_Scaf11563_1.13ACYL-COA DEHYDROGENASE
PE_Scaf11563_1.3DUAL SPECIFICITY PROTEIN PHOSPHATASE
PE_Scaf11563_1.9THAP DOMAIN PROTEIN
PE_Scaf11566_1.1
PE_Scaf11566_1.3
PE_Scaf11567_0.1
PE_Scaf11567_1.2
PE_Scaf11567_2.0
PE_Scaf11567_2.2UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
PE_Scaf11567_2.6
PE_Scaf11572_0.5HEPARAN SULFATE SULFOTRANSFERASE
PE_Scaf11572_0.6ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
PE_Scaf11573_0.1
PE_Scaf11579_0.7GATOR COMPLEX PROTEIN WDR24
PE_Scaf11579_0.8ACID PHOSPHATASE-RELATED
PE_Scaf1157_0.0
PE_Scaf11582_1.4SOLUTE CARRIER FAMILY 40 MEMBER
PE_Scaf11582_1.5PROTEIN FAM221A-RELATED
PE_Scaf11582_2.4MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 24
PE_Scaf11582_2.7
PE_Scaf11582_5.4
PE_Scaf11584_0.6AMINOTRANSFERASE
PE_Scaf11584_0.8PATCHED-RELATED
PE_Scaf11585_0.5
PE_Scaf11585_0.7
PE_Scaf11586_0.0
PE_Scaf11586_0.4
PE_Scaf11589_1.0
PE_Scaf11589_1.3ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
PE_Scaf11592_0.2
PE_Scaf11592_1.2THIOREDOXIN PEROXIDASE
PE_Scaf11592_2.3COILED-COIL DOMAIN-CONTAINING PROTEIN 181
PE_Scaf11592_2.6PROTEIN CIP2A
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