About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf11515_2.8NF-KAPPA-B INHIBITOR-INTERACTING RAS-LIKE PROTEIN
PE_Scaf11515_4.5PHENYLALANYL-TRNA SYNTHETASE
PE_Scaf11515_4.9PROTEIN CBG05349
PE_Scaf11515_6.0
PE_Scaf11515_6.3CADHERIN-23
PE_Scaf11515_8.10CADHERIN-23
PE_Scaf11515_8.2CADHERIN-23
PE_Scaf11515_8.3CADHERIN-23
PE_Scaf11515_8.6
PE_Scaf11516_1.3
PE_Scaf11516_2.3ORGANIC ANION TRANSPORTER
PE_Scaf11516_3.9ORGANIC ANION TRANSPORTER
PE_Scaf11517_0.5
PE_Scaf11517_1.0-
PE_Scaf11517_1.1
PE_Scaf11517_1.4BCL-2 RELATED
PE_Scaf11518_0.2TRNA-DIHYDROURIDINE SYNTHASE
PE_Scaf11519_0.4
PE_Scaf11519_1.6ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
PE_Scaf11519_1.7TETRASPANIN
PE_Scaf1151_0.4
PE_Scaf11521_1.0
PE_Scaf11521_5.5ALDEHYDE DEHYDROGENASE-RELATED
PE_Scaf11522_1.0
PE_Scaf11522_1.6COLLAGEN ALPHA
PE_Scaf11522_1.8INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
PE_Scaf11523_0.3
PE_Scaf11524_1.7EXPORTIN 4,7-RELATED
PE_Scaf11524_3.33-5 EXONUCLEASE
PE_Scaf11524_4.10UNCHARACTERIZED
PE_Scaf11524_4.728S RIBOSOMAL PROTEIN S26, MITOCHONDRIAL
PE_Scaf11524_5.3UNCHARACTERIZED
PE_Scaf11524_6.6UNCHARACTERIZED
PE_Scaf11524_7.6TRANSCRIPTION FACTOR COE FAMILY MEMBER
PE_Scaf11526_1.1
PE_Scaf11526_2.7
PE_Scaf11526_4.4RETICULOCALBIN
PE_Scaf11532_0.4COP1-INTERACTIVE PROTEIN 1
PE_Scaf11532_0.6BETA-1,4-GALACTOSYLTRANSFERASE
PE_Scaf11532_0.7BETA-1,4-GALACTOSYLTRANSFERASE
PE_Scaf11532_1.3PARANEOPLASTIC ANTIGEN
PE_Scaf11533_0.0
PE_Scaf11533_0.8
PE_Scaf11533_0.9
PE_Scaf11536_1.3
PE_Scaf11536_3.0POLYCYSTIN FAMILY MEMBER
PE_Scaf11536_3.9PROTEIN DISULFIDE ISOMERASE
PE_Scaf1153_0.0
PE_Scaf11543_0.2N-TERMINAL ACETYLTRANSFERASE-RELATED
PE_Scaf11549_0.0
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