The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g12653 | PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE |
| MBSQW58_g12654 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
| MBSQW58_g12655 | ARMADILLO-TYPE FOLD-RELATED |
| MBSQW58_g12656 | NEUROLIGIN |
| MBSQW58_g12657 | |
| MBSQW58_g12658 | ARMADILLO-TYPE FOLD-RELATED |
| MBSQW58_g12659 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
| MBSQW58_g1266 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 4 |
| MBSQW58_g12660 | |
| MBSQW58_g12661 | NUCLEOPROTEIN TPR-RELATED |
| MBSQW58_g12662 | ENOYL-COA HYDRATASE |
| MBSQW58_g12663 | PROTON CHANNEL OTOP |
| MBSQW58_g12664 | MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED |
| MBSQW58_g12665 | SURFACE ANTIGEN BSPA-LIKE-RELATED |
| MBSQW58_g12666 | ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g12667 | |
| MBSQW58_g12668 | ZINC FINGER PROTEIN |
| MBSQW58_g12669 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| MBSQW58_g1267 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
| MBSQW58_g12670 | |
| MBSQW58_g12671 | TETRATRICOPEPTIDE REPEAT PROTEIN 38 |
| MBSQW58_g12672 | CARRIER DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g12673 | NNMT/PNMT/TEMT FAMILY MEMBER |
| MBSQW58_g12674 | |
| MBSQW58_g12675 | |
| MBSQW58_g12676 | STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL |
| MBSQW58_g12677 | CELL DIVISION PROTEIN KINASE |
| MBSQW58_g12678 | |
| MBSQW58_g12679 | |
| MBSQW58_g1268 | |
| MBSQW58_g12680 | |
| MBSQW58_g12681 | PHOSPHOHEXOMUTASE FAMILY MEMBER |
| MBSQW58_g12682 | T-BOX PROTEIN-RELATED |
| MBSQW58_g12683 | CHITIN BINDING PERITROPHIN-A |
| MBSQW58_g12684 | DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C |
| MBSQW58_g12685 | UPF0764 PROTEIN C16ORF89 |
| MBSQW58_g12686 | DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT |
| MBSQW58_g12687 | |
| MBSQW58_g12688 | |
| MBSQW58_g12689 | |
| MBSQW58_g1269 | |
| MBSQW58_g12690 | |
| MBSQW58_g12691 | |
| MBSQW58_g12692 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
| MBSQW58_g12693 | |
| MBSQW58_g12694 | |
| MBSQW58_g12695 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
| MBSQW58_g12696 | UNCHARACTERIZED |
| MBSQW58_g12697 | |
| MBSQW58_g12698 | F-BOX ONLY PROTEIN 15 |
