The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g12383 | PROTEIN DISULFIDE-ISOMERASE A6 |
| MBSQW58_g12384 | RAS-RELATED PROTEIN RAB |
| MBSQW58_g12385 | NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1 |
| MBSQW58_g12386 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
| MBSQW58_g12387 | PROTEIN-TYROSINE-PHOSPHATASE |
| MBSQW58_g12388 | PROTEIN-TYROSINE-PHOSPHATASE |
| MBSQW58_g12389 | TETRASPANIN |
| MBSQW58_g1239 | NARDILYSIN |
| MBSQW58_g12390 | S-ADENOSYL-METHYLTRANSFERASE MRAW |
| MBSQW58_g12391 | ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN |
| MBSQW58_g12392 | TRANSMEMBRANE PROTEIN 117 |
| MBSQW58_g12393 | |
| MBSQW58_g12394 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 5 |
| MBSQW58_g12395 | |
| MBSQW58_g12396 | TROPONIN T |
| MBSQW58_g12397 | |
| MBSQW58_g12398 | TELOMERASE RNA COMPONENT INTERACTING RNASE |
| MBSQW58_g12399 | DELTA ADAPTIN-RELATED |
| MBSQW58_g124 | |
| MBSQW58_g1240 | RIBONUCLEASE H1 |
| MBSQW58_g12400 | DELTA ADAPTIN-RELATED |
| MBSQW58_g12401 | CELLULOSE SYNTHASE OPERON PROTEIN C |
| MBSQW58_g12402 | TETRATRICOPEPTIDE REPEAT PROTEIN 22 |
| MBSQW58_g12403 | CELL DIVISION CYCLE 16,23,27 |
| MBSQW58_g12404 | TETRATRICOPEPTIDE REPEAT PROTEIN 22 |
| MBSQW58_g12405 | |
| MBSQW58_g12406 | |
| MBSQW58_g12407 | POTE ANKYRIN DOMAIN |
| MBSQW58_g12408 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| MBSQW58_g12409 | ZINC FINGER PROTEIN |
| MBSQW58_g1241 | EQUILIBRATIVE NUCLEOSIDE TRANSPORTER |
| MBSQW58_g12410 | PR DOMAIN ZINC FINGER PROTEIN |
| MBSQW58_g12411 | ZINC FINGER PROTEIN |
| MBSQW58_g12412 | MYELIN TRANSCRIPTION FACTOR 1-RELATED |
| MBSQW58_g12413 | MYELIN TRANSCRIPTION FACTOR 1-RELATED |
| MBSQW58_g12414 | MYELIN TRANSCRIPTION FACTOR 1-RELATED |
| MBSQW58_g12415 | ZINC FINGER PROTEIN |
| MBSQW58_g12416 | ZINC FINGER PROTEIN |
| MBSQW58_g12417 | 3-KETO-STEROID REDUCTASE |
| MBSQW58_g12418 | 3-KETO-STEROID REDUCTASE |
| MBSQW58_g12419 | SAP DOMAIN-CONTAINING RIBONUCLEOPROTEIN |
| MBSQW58_g1242 | |
| MBSQW58_g12420 | UNCHARACTERIZED |
| MBSQW58_g12421 | CENTROMERE PROTEIN E |
| MBSQW58_g12422 | SRCR DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g12423 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| MBSQW58_g12424 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| MBSQW58_g12425 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| MBSQW58_g12426 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| MBSQW58_g12427 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
