The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g12338 | |
| MBSQW58_g12339 | WNT RELATED |
| MBSQW58_g1234 | |
| MBSQW58_g12340 | WNT RELATED |
| MBSQW58_g12341 | USE1-LIKE PROTEIN |
| MBSQW58_g12342 | TESTIS-EXPRESSED PROTEIN 45 |
| MBSQW58_g12343 | HISTONE H2B |
| MBSQW58_g12344 | NADH DEHYDROGENASE UBIQUINONE 1 ALPHA SUBCOMPLEX SUBUNIT 13 |
| MBSQW58_g12345 | GLYCOSYLATED LYSOSOMAL MEMBRANE PROTEIN |
| MBSQW58_g12346 | |
| MBSQW58_g12347 | BONE MARROW PROTEOGLYCAN |
| MBSQW58_g12348 | COLON CANCER-ASSOCIATED PROTEIN MIC1 |
| MBSQW58_g12349 | BAP28 |
| MBSQW58_g1235 | CHONDROITIN SYNTHASE |
| MBSQW58_g12350 | BAP28 |
| MBSQW58_g12351 | CYTOSINE-SPECIFIC METHYLTRANSFERASE |
| MBSQW58_g12352 | STEROL DESATURASE |
| MBSQW58_g12353 | ODD-SKIPPED - RELATED |
| MBSQW58_g12354 | |
| MBSQW58_g12355 | DNA2/NAM7 HELICASE FAMILY |
| MBSQW58_g12356 | |
| MBSQW58_g12357 | |
| MBSQW58_g12358 | |
| MBSQW58_g12359 | |
| MBSQW58_g1236 | CHONDROITIN SYNTHASE |
| MBSQW58_g12360 | |
| MBSQW58_g12361 | |
| MBSQW58_g12362 | |
| MBSQW58_g12363 | SOLUTE CARRIER FAMILY 35 |
| MBSQW58_g12364 | PHOSDUCIN-LIKE PROTEIN |
| MBSQW58_g12365 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
| MBSQW58_g12366 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE |
| MBSQW58_g12367 | NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2 |
| MBSQW58_g12368 | PROTEIN MCM10 HOMOLOG |
| MBSQW58_g12369 | |
| MBSQW58_g1237 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
| MBSQW58_g12370 | DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED |
| MBSQW58_g12371 | VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM |
| MBSQW58_g12372 | |
| MBSQW58_g12373 | |
| MBSQW58_g12374 | |
| MBSQW58_g12375 | RYBP AND YAF2-RELATED |
| MBSQW58_g12376 | |
| MBSQW58_g12377 | |
| MBSQW58_g12378 | |
| MBSQW58_g12379 | EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED |
| MBSQW58_g1238 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
| MBSQW58_g12380 | TUBULIN |
| MBSQW58_g12381 | PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE |
| MBSQW58_g12382 |
