Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Lamellibrachia (Genus); Lamellibrachia satsuma (Species)
Lamellibrachia satsuma Miura, 1997
1. Miura T. Lamellibrachia satsuma, a new species of vestimentiferan worms (Annelida: Pogonophora) from a shallow hydrothermal vent in Kagoshima Bay, Japan[J]. Proceedings of the Biological Society of Washington, 1997, 110: 447-456. (Miura et al., 1997)
The species has been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m (3,840 ft) depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
---|---|---|---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50 | 8,074/6,600 | 40.2 | - | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s020.g0273.t1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 22 |
Lsat_s020.g0274.t1 | SUPPRESSOR OF TY 4 |
Lsat_s020.g0275.t1 | BOMBESIN RECEPTOR-ACTIVATED PROTEIN C6ORF89 |
Lsat_s020.g0276.t1 | TP53-REGULATED INHIBITOR OF APOPTOSIS 1 |
Lsat_s020.g0277.t1 | - |
Lsat_s020.g0278.t1 | - |
Lsat_s020.g0279.t1 | - |
Lsat_s020.g0280.t1 | - |
Lsat_s020.g0281.t1 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Lsat_s020.g0282.t1 | VITAMIN K EPOXIDE REDUCTASE COMPLEX, SUBUNIT 1 |
Lsat_s020.g0283.t1 | TRANSCRIPTION INITIATION FACTOR IIH TFIIH , POLYPEPTIDE 3-RELATED |
Lsat_s020.g0284.t1 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
Lsat_s020.g0285.t1 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Lsat_s020.g0286.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s020.g0287.t1 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Lsat_s020.g0288.t1 | - |
Lsat_s020.g0289.t1 | PYRUVATE DEHYDROGENASE KINASE |
Lsat_s020.g0290.t1 | CYTOSINE DEAMINASE FAMILY MEMBER |
Lsat_s020.g0291.t1 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Lsat_s020.g0292.t1 | - |