About Riftia pachyptila

Riftia pachyptila, commonly known as the giant tube worm, is a marine invertebrate in the phylum Annelida. It inhabits hydrothermal vent ecosystems on the Pacific Ocean floor, where temperatures range from 2 to 30 °C. This species can tolerate extremely high hydrogen sulfide levels and relies entirely on symbiotic sulfur-oxidizing bacteria housed in its trophosome for nutrition. These worms can grow up to 3 meters in length, with tubular bodies reaching a diameter of 4 cm, making them one of the most iconic organisms in deep-sea vent ecosystems.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Riftia pachyptilaAnnelidaCold seep, Hydrothermal vent2,514 hydrothermal vent site Tica, East Pacific Rise (Alvin dive 4839, 9°50.398′N, 104°17.506′W)6426

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-560.7MbContig2022-University of ViennaPRJNA75449399.37%25,984
-554MbContig2023-QUEEN MARY UNIVERSITY OF LONDONPRJEB5504795.60%37,037

References
TitleJournalPubmed ID
Novel Insights on Obligate Symbiont Lifestyle and Adaptation to Chemosynthetic Environment as Revealed by the Giant Tubeworm GenomeMolecular Biology and Evolution34893862
Distinct genomic routes underlie transitions to specialised symbiotic lifestyles in deep-sea annelid wormsnature communications37198188

Gene Information

<< First 517 518 519 520 521 522 523 524 525 526 Forward> Last>>        604 pages in total

Gene IDDescription
RPACG23187.1RPA-RELATED PROTEIN RADX
RPACG23188.1
RPACG23189.1CELL FATE DETERMINING PROTEIN MAB21-RELATED
RPACG23189.2
RPACG23190.1
RPACG23191.1ATP SYNTHASE COUPLING FACTOR 6, MITOCHONDRIAL
RPACG23192.1ETS
RPACG23192.2
RPACG23193.1RADIAL SPOKE HEAD 1 HOMOLOG
RPACG23194.1LATROPHILIN RECEPTOR-LIKE PROTEIN A
RPACG23195.1
RPACG23196.1
RPACG23197.1
RPACG23198.1FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEIN
RPACG23199.1NEGATIVE REGULATOR OF VESICLE FORMATION-RELATED
RPACG23199.2
RPACG23200.1
RPACG23201.1
RPACG23202.1
RPACG23203.1NEGATIVE REGULATOR OF VESICLE FORMATION-RELATED
RPACG23203.2
RPACG23204.1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
RPACG23205.1
RPACG23206.1-
RPACG23207.1
RPACG23208.1
RPACG23208.2
RPACG23209.1PROTEIN CBG17025
RPACG23210.1G-PROTEIN COUPLED RECEPTOR
RPACG23210.2
RPACG23210.3
RPACG23210.4
RPACG23211.1-
RPACG23212.1UNCHARACTERIZED
RPACG23213.1
RPACG23213.2
RPACG23214.1
RPACG23215.1
RPACG23216.1
RPACG23217.1
RPACG23217.2
RPACG23218.1
RPACG23219.1
RPACG23220.1G-PROTEIN COUPLED RECEPTOR TKR-1-RELATED
RPACG23221.1
RPACG23222.1G-PROTEIN COUPLED RECEPTOR
RPACG23223.1
RPACG23224.1
RPACG23225.1
RPACG23226.1
TOP