The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g9617 | ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED |
| MBSQW58_g9618 | |
| MBSQW58_g9619 | BLR2807 PROTEIN |
| MBSQW58_g962 | MONOCARBOXYLATE TRANSPORTER |
| MBSQW58_g9620 | KELCH DOMAIN-CONTAINING PROTEIN 10 |
| MBSQW58_g9621 | NUCLEAR-INTERACTING PARTNER OF ALK |
| MBSQW58_g9622 | |
| MBSQW58_g9623 | TRANSMEMBRANE CHANNEL-RELATED |
| MBSQW58_g9624 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
| MBSQW58_g9625 | |
| MBSQW58_g9626 | UNCHARACTERIZED |
| MBSQW58_g9627 | GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE |
| MBSQW58_g9628 | ACETYL-COA HYDROLASE-RELATED |
| MBSQW58_g9629 | ELONGATOR COMPLEX PROTEIN 5 |
| MBSQW58_g963 | XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED |
| MBSQW58_g9630 | |
| MBSQW58_g9631 | LEUCINE RICH REPEAT PROTEIN |
| MBSQW58_g9632 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 |
| MBSQW58_g9633 | TRANSPOSON |
| MBSQW58_g9634 | UREASE ACCESSORY PROTEIN F |
| MBSQW58_g9635 | PHYTANOYL-COA DIOXYGENASE-RELATED-RELATED |
| MBSQW58_g9636 | D-AMINO ACID OXIDASE |
| MBSQW58_g9637 | IKB KINASE |
| MBSQW58_g9638 | DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| MBSQW58_g9639 | TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 |
| MBSQW58_g964 | 2-5 OLIGOADENYLATE SYNTHETASE |
| MBSQW58_g9640 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
| MBSQW58_g9641 | LITHOSTATHINE |
| MBSQW58_g9642 | |
| MBSQW58_g9643 | SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F |
| MBSQW58_g9644 | UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49 |
| MBSQW58_g9645 | UROCANATE HYDRATASE |
| MBSQW58_g9646 | |
| MBSQW58_g9647 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| MBSQW58_g9648 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
| MBSQW58_g9649 | TRANSMEMBRANE CHANNEL-RELATED |
| MBSQW58_g965 | ADP-RIBOSYL CYCLASE |
| MBSQW58_g9650 | DYSTROBREVIN BINDING PROTEIN 1 DYSBINDIN |
| MBSQW58_g9651 | TRANSMEMBRANE CHANNEL-RELATED |
| MBSQW58_g9652 | |
| MBSQW58_g9653 | F-BOX FAMILY PROTEIN |
| MBSQW58_g9654 | TELOMERASE PROTEIN COMPONENT 1 TEP1 |
| MBSQW58_g9655 | TELOMERASE PROTEIN COMPONENT 1 TEP1 |
| MBSQW58_g9656 | TELOMERASE PROTEIN COMPONENT 1 TEP1 |
| MBSQW58_g9657 | |
| MBSQW58_g9658 | TRANSMEMBRANE CHANNEL-RELATED |
| MBSQW58_g9659 | |
| MBSQW58_g966 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
| MBSQW58_g9660 | MULTIVESICULAR BODY SUBUNIT 12B |
| MBSQW58_g9661 | TUBULIN |
