The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g9482 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| MBSQW58_g9483 | |
| MBSQW58_g9484 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| MBSQW58_g9485 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| MBSQW58_g9486 | AP1 GAMMA SUBUNIT BINDING PROTEIN 1 |
| MBSQW58_g9487 | AP1 GAMMA SUBUNIT BINDING PROTEIN 1 |
| MBSQW58_g9488 | |
| MBSQW58_g9489 | |
| MBSQW58_g949 | |
| MBSQW58_g9490 | |
| MBSQW58_g9491 | |
| MBSQW58_g9492 | |
| MBSQW58_g9493 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| MBSQW58_g9494 | REVERSE TRANSCRIPTASES |
| MBSQW58_g9495 | |
| MBSQW58_g9496 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g9497 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
| MBSQW58_g9498 | |
| MBSQW58_g9499 | DOCKING PROTEIN RELATED |
| MBSQW58_g95 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 24 |
| MBSQW58_g950 | NUCLEAR RECEPTOR SUBFAMILY 0 GROUP B |
| MBSQW58_g9500 | |
| MBSQW58_g9501 | |
| MBSQW58_g9502 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
| MBSQW58_g9503 | DNA2/NAM7 HELICASE FAMILY MEMBER |
| MBSQW58_g9504 | FORKHEAD BOX PROTEIN |
| MBSQW58_g9505 | GLYCOGEN SYNTHASE |
| MBSQW58_g9506 | |
| MBSQW58_g9507 | REVERSE TRANSCRIPTASE |
| MBSQW58_g9508 | |
| MBSQW58_g9509 | |
| MBSQW58_g951 | USP DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g9510 | RHOMBOID-RELATED PROTEIN |
| MBSQW58_g9511 | RIBONUCLEASE |
| MBSQW58_g9512 | - |
| MBSQW58_g9513 | |
| MBSQW58_g9514 | |
| MBSQW58_g9515 | |
| MBSQW58_g9516 | JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE |
| MBSQW58_g9517 | APRATAXIN-RELATED |
| MBSQW58_g9518 | BIOTIN PROTEIN LIGASE |
| MBSQW58_g9519 | DNA POLYMERASE CATALYTIC SUBUNIT |
| MBSQW58_g952 | TRANSMEMBRANE PROTEIN 2-RELATED |
| MBSQW58_g9520 | |
| MBSQW58_g9521 | |
| MBSQW58_g9522 | |
| MBSQW58_g9523 | |
| MBSQW58_g9524 | |
| MBSQW58_g9525 | ENDONUCLEASE DOMAIN-CONTAINING 1 PROTEIN ENDOD1 |
| MBSQW58_g9526 |
