About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf9344_0.1NUMB
PE_Scaf9345_0.0
PE_Scaf9345_0.2
PE_Scaf9345_0.3
PE_Scaf9346_10.3DNA REPAIR PROTEIN SWI5 HOMOLOG
PE_Scaf9346_11.1
PE_Scaf9346_11.10ATF6, ISOFORM C
PE_Scaf9346_11.8PRESEQUENCE PROTEASE
PE_Scaf9346_11.9TFIIH, POLYPEPTIDE 4
PE_Scaf9346_4.1EXOCYST COMPLEX COMPONENT 4
PE_Scaf9346_5.3
PE_Scaf9346_6.0
PE_Scaf9346_6.2
PE_Scaf9346_7.2
PE_Scaf9346_8.3
PE_Scaf9346_9.5
PE_Scaf9346_9.6
PE_Scaf9346_9.9
PE_Scaf9347_0.6
PE_Scaf9347_0.7DNA2/NAM7 HELICASE FAMILY MEMBER
PE_Scaf9348_0.0
PE_Scaf9348_0.6
PE_Scaf9349_0.13
PE_Scaf9349_0.9ANKYRIN REPEAT DOMAIN 36-RELATED
PE_Scaf934_0.1ATP-DEPENDENT RNA HELICASE
PE_Scaf9350_0.2
PE_Scaf9350_1.11
PE_Scaf9350_1.12NEUROTRANSMITTER GATED ION CHANNEL
PE_Scaf9350_1.13
PE_Scaf9350_1.14
PE_Scaf9350_1.4
PE_Scaf9353_0.2PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G03330)-RELATED
PE_Scaf9355_0.0
PE_Scaf9355_0.1
PE_Scaf9355_0.3
PE_Scaf9357_1.1
PE_Scaf9357_1.5OLFACTOMEDIN-RELATED
PE_Scaf9358_0.0
PE_Scaf935_0.3PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
PE_Scaf9360_0.0
PE_Scaf9360_0.1
PE_Scaf9360_0.6LYSINE-SPECIFIC DEMETHYLASE
PE_Scaf9361_0.1ZINC FINGER PROTEIN
PE_Scaf9361_0.2ZINC FINGER PROTEIN 200
PE_Scaf9363_0.3
PE_Scaf9364_0.0
PE_Scaf9365_0.0
PE_Scaf9365_0.8
PE_Scaf9368_2.3GH10160P
PE_Scaf9368_3.2PROLINE-RICH NUCLEAR RECEPTOR COACTIVATOR
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