About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf9222_10.0
PE_Scaf9222_10.1
PE_Scaf9222_10.4COLLAGEN ALPHA
PE_Scaf9222_10.6COLLAGEN ALPHA
PE_Scaf9222_11.1COLLAGEN
PE_Scaf9222_3.0THAP DOMAIN PROTEIN
PE_Scaf9222_5.3ETS
PE_Scaf9222_6.3
PE_Scaf9222_6.4
PE_Scaf9222_7.4COLLAGEN ALPHA
PE_Scaf9222_9.2COLLAGEN ALPHA
PE_Scaf9222_9.3COLLAGEN ALPHA
PE_Scaf9224_0.0
PE_Scaf9224_0.1
PE_Scaf9227_0.0
PE_Scaf9227_0.2
PE_Scaf9227_1.1LD30288P
PE_Scaf9227_2.2CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2
PE_Scaf9227_2.5UPF0573 PROTEIN C2ORF70
PE_Scaf9227_3.6CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2
PE_Scaf9228_1.11URACIL-DNA GLYCOSYLASE
PE_Scaf9228_1.17ASPARTATE AMINOTRANSFERASE
PE_Scaf9228_1.18
PE_Scaf9228_1.20SWI5-DEPENDENT RECOMBINATION DNA REPAIR PROTEIN 1 HOMOLOG
PE_Scaf9228_1.21GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
PE_Scaf9230_0.12PHOSPHOENOLPYRUVATE CARBOXYKINASE
PE_Scaf923_0.0
PE_Scaf9241_0.2WSCD FAMILY MEMBER CG9164
PE_Scaf9241_4.12
PE_Scaf9241_4.21
PE_Scaf9241_4.22EG:EG0003.4 PROTEIN-RELATED
PE_Scaf9241_4.24EG:EG0003.4 PROTEIN-RELATED
PE_Scaf9241_4.3EG:EG0003.4 PROTEIN-RELATED
PE_Scaf9241_4.5
PE_Scaf9241_4.9EG:EG0003.4 PROTEIN-RELATED
PE_Scaf9241_5.15HOMEOBOX PROTEIN ENGRAILED
PE_Scaf9243_0.0
PE_Scaf9244_1.2
PE_Scaf9244_1.6
PE_Scaf9244_3.3PALMITOYLTRANSFERASE
PE_Scaf9244_4.3
PE_Scaf9245_1.3EPITHELIAL MEMBRANE PROTEIN-RELATED
PE_Scaf9245_2.5ALMS1-RELATED
PE_Scaf9245_2.6ATP-DEPENDENT RNA AND DNA HELICASE
PE_Scaf9248_0.4EXPRESSED PROTEIN
PE_Scaf924_0.1NOTCH LIGAND FAMILY MEMBER
PE_Scaf9251_0.0
PE_Scaf9251_0.1
PE_Scaf9252_0.3
PE_Scaf9252_0.6
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