Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00204510 | |
| SKAU_T00204520 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00204530 | |
| SKAU_T00204540 | |
| SKAU_T00204550 | |
| SKAU_T00204560 | TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS |
| SKAU_T00204570 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| SKAU_T00204580 | BESTROPHIN |
| SKAU_T00204590 | 40S RIBOSOMAL PROTEIN S8 |
| SKAU_T00204600 | E3 UBIQUITIN-PROTEIN LIGASE HECTD3 |
| SKAU_T00204610 | METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED |
| SKAU_T00204620 | |
| SKAU_T00204630 | ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6 |
| SKAU_T00204640 | |
| SKAU_T00204650 | |
| SKAU_T00204660 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00204670 | OLFACTOMEDIN-RELATED |
| SKAU_T00204680 | |
| SKAU_T00204690 | PROTEIN KIAA0494 |
| SKAU_T00204700 | IGLON FAMILY OF IMMUNOGLOBULIN SUPERFAMILY-RELATED |
| SKAU_T00204710 | |
| SKAU_T00204720 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00204730 | BNIP - RELATED |
| SKAU_T00204740 | EH DOMAIN |
| SKAU_T00204750 | EH DOMAIN |
| SKAU_T00204760 | |
| SKAU_T00204770 | |
| SKAU_T00204780 | AP COMPLEX SUBUNIT MU |
| SKAU_T00204790 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00204800 | NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT |
| SKAU_T00204810 | GDNF SUBFAMILY OF TGF-BETA FAMILY |
| SKAU_T00204820 | CALCYPHOSIN |
| SKAU_T00204830 | RAN BINDING PROTEIN |
| SKAU_T00204840 | SMALL INDUCIBLE CYTOKINE A |
| SKAU_T00204850 | CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2 |
| SKAU_T00204860 | RIKEN CDNA A430078G23 GENE |
| SKAU_T00204870 | AGAP007712-PA |
| SKAU_T00204880 | TYROSINE-PROTEIN KINASE RECEPTOR |
| SKAU_T00204890 | XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED |
| SKAU_T00204900 | SYNTHASE CPS1, PUTATIVE (AFU_ORTHOLOGUE AFUA_7G02500)-RELATED |
| SKAU_T00204910 | VASCULAR CELL ADHESION MOLECULE 1 |
| SKAU_T00204920 | |
| SKAU_T00204930 | |
| SKAU_T00204940 | ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 |
| SKAU_T00204950 | |
| SKAU_T00204960 | DULLARD PROTEIN PHOSPHATASE |
| SKAU_T00204970 | NADH DEHYDROGENASE |
| SKAU_T00204980 | CALRETICULIN AND CALNEXIN |
| SKAU_T00204990 | TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBER |
| SKAU_T00205000 | GEO07743P1 |
