Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00202010 | LD11652P |
| SKAU_T00202020 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
| SKAU_T00202030 | |
| SKAU_T00202040 | |
| SKAU_T00202050 | SELENOPROTEIN F |
| SKAU_T00202060 | SELENOPROTEIN F |
| SKAU_T00202070 | CLAUDIN |
| SKAU_T00202080 | |
| SKAU_T00202090 | TRANSDUCIN-LIKE ENHANCER PROTEIN |
| SKAU_T00202100 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| SKAU_T00202110 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| SKAU_T00202120 | CYTOKINESIS PROTEIN 3 |
| SKAU_T00202130 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| SKAU_T00202140 | SOX TRANSCRIPTION FACTOR |
| SKAU_T00202150 | |
| SKAU_T00202160 | |
| SKAU_T00202170 | |
| SKAU_T00202180 | KELCH PROTEIN |
| SKAU_T00202190 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| SKAU_T00202200 | CGI-12 PROTEIN-RELATED |
| SKAU_T00202210 | MITOCHONDRIAL UBIQUITIN LIGASE ACTIVATOR OF NFKB 1 |
| SKAU_T00202220 | KELCH PROTEIN |
| SKAU_T00202230 | YEATS DOMAIN |
| SKAU_T00202240 | |
| SKAU_T00202250 | |
| SKAU_T00202260 | |
| SKAU_T00202270 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| SKAU_T00202280 | |
| SKAU_T00202290 | |
| SKAU_T00202300 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| SKAU_T00202310 | CENTROSOMAL PROTEIN OF 44 KDA |
| SKAU_T00202320 | PHOSPHOLIPID SCRAMBLASE-RELATED |
| SKAU_T00202330 | NEUROTRANSMITTER GATED ION CHANNEL |
| SKAU_T00202340 | |
| SKAU_T00202350 | |
| SKAU_T00202360 | |
| SKAU_T00202370 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5B2-RELATED |
| SKAU_T00202380 | NOT56 - RELATED |
| SKAU_T00202390 | |
| SKAU_T00202400 | |
| SKAU_T00202410 | CALPAIN |
| SKAU_T00202420 | CALPAIN |
| SKAU_T00202430 | |
| SKAU_T00202440 | EPH RECEPTOR A5 |
| SKAU_T00202450 | |
| SKAU_T00202460 | |
| SKAU_T00202470 | MITOCHONDRIAL CARRIER PROTEIN RIM2 |
| SKAU_T00202480 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
| SKAU_T00202490 | |
| SKAU_T00202500 |
