Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00206010 | GLUTATHIONE PEROXIDASE |
| SKAU_T00206020 | |
| SKAU_T00206030 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 |
| SKAU_T00206040 | SPERMATHECAL PHYSIOLOGY VARIANT |
| SKAU_T00206050 | STRAWBERRY NOTCH-RELATED |
| SKAU_T00206060 | STRAWBERRY NOTCH-RELATED |
| SKAU_T00206070 | STRAWBERRY NOTCH-RELATED |
| SKAU_T00206080 | TRANSMEMBRANE SUPERFAMILY 6 MEMBER 1/2 |
| SKAU_T00206090 | SORTING NEXIN |
| SKAU_T00206100 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| SKAU_T00206110 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| SKAU_T00206120 | DNA-DIRECTED RNA POLYMERASE II, III |
| SKAU_T00206130 | TRANSMEMBRANE PROTEIN 196 |
| SKAU_T00206140 | UBIQUITIN-CONJUGATING ENZYME E2 |
| SKAU_T00206150 | POLY [ADP-RIBOSE] POLYMERASE |
| SKAU_T00206160 | HYPERKINETIC, ISOFORM M |
| SKAU_T00206170 | |
| SKAU_T00206180 | GMP SYNTHASE-RELATED |
| SKAU_T00206190 | SOLUTE CARRIER FAMILY 33 ACETYL-COA TRANSPORTER -RELATED |
| SKAU_T00206200 | |
| SKAU_T00206210 | |
| SKAU_T00206220 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| SKAU_T00206230 | MUSCLEBLIND-LIKE PROTEIN |
| SKAU_T00206240 | |
| SKAU_T00206250 | ATP-BINDING TRANSPORT PROTEIN-RELATED |
| SKAU_T00206260 | UNCHARACTERIZED |
| SKAU_T00206270 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
| SKAU_T00206280 | THROMBOPOIETIN |
| SKAU_T00206290 | |
| SKAU_T00206300 | |
| SKAU_T00206310 | |
| SKAU_T00206320 | |
| SKAU_T00206330 | |
| SKAU_T00206340 | CHLORIDE CHANNEL PROTEIN 2 |
| SKAU_T00206350 | CHLORIDE CHANNEL PROTEIN 2 |
| SKAU_T00206360 | PROTEIN FAM131B-RELATED |
| SKAU_T00206370 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA |
| SKAU_T00206380 | |
| SKAU_T00206390 | |
| SKAU_T00206400 | RHOMBOID PROTEASE |
| SKAU_T00206410 | INTERFERON/INTERLEUKIN RECEPTOR |
| SKAU_T00206420 | |
| SKAU_T00206430 | AUTOPHAGY PROTEIN 16-LIKE |
| SKAU_T00206440 | AUTOPHAGY PROTEIN 16-LIKE |
| SKAU_T00206450 | ARRESTIN |
| SKAU_T00206460 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
| SKAU_T00206470 | COAGULATION FACTOR |
| SKAU_T00206480 | |
| SKAU_T00206490 | |
| SKAU_T00206500 | IP21249P |
