About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold7461.19275
mRNA.BJAM.scaffold7461.19276
mRNA.BJAM.scaffold7461.19277
mRNA.BJAM.scaffold7462.19278
mRNA.BJAM.scaffold7465.19279NUCLEAR HORMONE RECEPTOR
mRNA.BJAM.scaffold7465.19280NUCLEAR HORMONE RECEPTOR
mRNA.BJAM.scaffold7466.19281
mRNA.BJAM.scaffold7466.19282
mRNA.BJAM.scaffold7467.19283KINESIN LIGHT CHAIN
mRNA.BJAM.scaffold747.4968LONG-CHAIN-FATTY-ACID--COA LIGASE
mRNA.BJAM.scaffold747.4969LONG-CHAIN-FATTY-ACID--COA LIGASE
mRNA.BJAM.scaffold747.4970LONG-CHAIN-FATTY-ACID--COA LIGASE
mRNA.BJAM.scaffold747.4971BETA-1,4-GALACTOSYLTRANSFERASE
mRNA.BJAM.scaffold747.4972IMPORTIN BETA
mRNA.BJAM.scaffold747.4973BETA-1,4-GALACTOSYLTRANSFERASE
mRNA.BJAM.scaffold747.4974BETA-1,4-GALACTOSYLTRANSFERASE
mRNA.BJAM.scaffold747.497560 KDA RIBONUCLEOPROTEIN SSA/RO
mRNA.BJAM.scaffold747.4976TAX1 BINDING PROTEIN-RELATED
mRNA.BJAM.scaffold747.4977
mRNA.BJAM.scaffold747.4978
mRNA.BJAM.scaffold747.4979NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT
mRNA.BJAM.scaffold747.4980
mRNA.BJAM.scaffold747.4981LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN
mRNA.BJAM.scaffold747.4982
mRNA.BJAM.scaffold7470.19284
mRNA.BJAM.scaffold7470.19285CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
mRNA.BJAM.scaffold7470.19286GUANINE NUCLEOTIDE EXCHANGE FACTOR
mRNA.BJAM.scaffold7472.19289INTERFERON-RELATED DEVELOPMENTAL REGULATOR
mRNA.BJAM.scaffold7472.19290AHD DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold7473.19291HYCCIN RELATED
mRNA.BJAM.scaffold7473.19292
mRNA.BJAM.scaffold7473.19293
mRNA.BJAM.scaffold7473.19294
mRNA.BJAM.scaffold7473.19295
mRNA.BJAM.scaffold7478.19296MYOSIN
mRNA.BJAM.scaffold7479.19297TRNA (URACIL-5-)-METHYLTRANSFERASE
mRNA.BJAM.scaffold7484.19298SLD5 PROTEIN
mRNA.BJAM.scaffold7486.19299
mRNA.BJAM.scaffold7487.19301
mRNA.BJAM.scaffold7489.19302NEUROLIGIN
mRNA.BJAM.scaffold7491.19304CYCLIN-DEPENDENT KINASE INHIBITOR 1
mRNA.BJAM.scaffold7499.19305
mRNA.BJAM.scaffold7499.19306
mRNA.BJAM.scaffold75.547RIBOSOMAL PROTEIN S19P FAMILY MEMBER
mRNA.BJAM.scaffold75.548
mRNA.BJAM.scaffold750.4983IONOTROPIC RECEPTOR 20A-RELATED
mRNA.BJAM.scaffold750.4984DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED
mRNA.BJAM.scaffold750.4985-
mRNA.BJAM.scaffold750.4986BAX INHIBITOR-RELATED
mRNA.BJAM.scaffold750.4987
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