About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold7558.19359NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED
mRNA.BJAM.scaffold756.5036OLFACTOMEDIN-RELATED
mRNA.BJAM.scaffold7563.19360GLR0591 PROTEIN
mRNA.BJAM.scaffold7565.19361ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold7565.19362
mRNA.BJAM.scaffold7565.19363ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold7565.19364ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold7567.19365
mRNA.BJAM.scaffold7568.19366UBIQUITIN
mRNA.BJAM.scaffold7568.19367
mRNA.BJAM.scaffold7569.19368
mRNA.BJAM.scaffold7569.19369MEMBRALIN/KINETOCHORE PROTEIN NUF2
mRNA.BJAM.scaffold757.5037
mRNA.BJAM.scaffold7570.19370SOLUTE CARRIER FAMILY 17
mRNA.BJAM.scaffold7573.19371UNCHARACTERIZED
mRNA.BJAM.scaffold7573.19372UNCHARACTERIZED
mRNA.BJAM.scaffold7574.19373ELONGATION FACTOR 1 ALPHA
mRNA.BJAM.scaffold7576.19374ZINC FINGER PROTEIN
mRNA.BJAM.scaffold7576.19375ZINC FINGER PROTEIN
mRNA.BJAM.scaffold7578.19376WD REPEAT PROTEIN 8-RELATED
mRNA.BJAM.scaffold7578.19377WD REPEAT PROTEIN 8-RELATED
mRNA.BJAM.scaffold7578.19378WD REPEAT PROTEIN 8-RELATED
mRNA.BJAM.scaffold7588.19379CYPHER, ISOFORM B
mRNA.BJAM.scaffold7588.19380REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT
mRNA.BJAM.scaffold7589.19381X-BOX BINDING PROTEIN 1
mRNA.BJAM.scaffold7589.19382CONDENSIN
mRNA.BJAM.scaffold7589.19383CONDENSIN
mRNA.BJAM.scaffold759.5038MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM22
mRNA.BJAM.scaffold759.5039KETIMINE REDUCTASE MU-CRYSTALLIN
mRNA.BJAM.scaffold759.5040HL01030P-RELATED
mRNA.BJAM.scaffold759.5041HL01030P-RELATED
mRNA.BJAM.scaffold759.5042
mRNA.BJAM.scaffold759.5043HL01030P-RELATED
mRNA.BJAM.scaffold759.5044HL01030P-RELATED
mRNA.BJAM.scaffold759.5045DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
mRNA.BJAM.scaffold759.5046
mRNA.BJAM.scaffold7590.19384
mRNA.BJAM.scaffold7591.19385TRANSLOCATION PROTEIN SEC62
mRNA.BJAM.scaffold7593.19386
mRNA.BJAM.scaffold7594.19387EGF-LIKE DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold7598.19388PHYTOENE DEHYDROGENASE
mRNA.BJAM.scaffold7598.19389PERICENTRIN-LIKE PROTEIN, ISOFORM F
mRNA.BJAM.scaffold7598.19390
mRNA.BJAM.scaffold7598.19391
mRNA.BJAM.scaffold7598.19392
mRNA.BJAM.scaffold7598.19393
mRNA.BJAM.scaffold7598.19394
mRNA.BJAM.scaffold7599.19395DYNACTIN SUBUNIT 5
mRNA.BJAM.scaffold7599.19396HISTONE DEACETYLASE 2-RELATED
mRNA.BJAM.scaffold76.549UNCHARACTERIZED
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