About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold7295.19120E3 UBIQUITIN-PROTEIN LIGASE MYCBP2
mRNA.BJAM.scaffold7295.19121SLR5058 PROTEIN
mRNA.BJAM.scaffold7299.19122TRANSDUCIN-LIKE ENHANCER PROTEIN
mRNA.BJAM.scaffold7299.19123PHOSPHORYLATED CTD INTERACTING FACTOR 1
mRNA.BJAM.scaffold7299.19124PHOSPHORYLATED CTD INTERACTING FACTOR 1
mRNA.BJAM.scaffold73.534
mRNA.BJAM.scaffold73.535
mRNA.BJAM.scaffold73.536
mRNA.BJAM.scaffold73.537
mRNA.BJAM.scaffold73.538
mRNA.BJAM.scaffold73.539
mRNA.BJAM.scaffold73.540U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN
mRNA.BJAM.scaffold73.541
mRNA.BJAM.scaffold73.542
mRNA.BJAM.scaffold73.543
mRNA.BJAM.scaffold73.544
mRNA.BJAM.scaffold730.4882MYELIN TRANSCRIPTION FACTOR 1-RELATED
mRNA.BJAM.scaffold730.4883MYELIN TRANSCRIPTION FACTOR 1-RELATED
mRNA.BJAM.scaffold7300.19125
mRNA.BJAM.scaffold7304.19126ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
mRNA.BJAM.scaffold7305.19127
mRNA.BJAM.scaffold7308.19128RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED
mRNA.BJAM.scaffold7308.19129
mRNA.BJAM.scaffold7308.19130HOMEOBOX PROTEIN ARISTALESS
mRNA.BJAM.scaffold7309.19131
mRNA.BJAM.scaffold7309.191324.1 G PROTEIN
mRNA.BJAM.scaffold7309.19133
mRNA.BJAM.scaffold7309.19134YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN
mRNA.BJAM.scaffold7309.19135
mRNA.BJAM.scaffold7310.19136FORKHEAD BOX PROTEIN O
mRNA.BJAM.scaffold7311.19137NEUROPEPTIDE Y RECEPTOR
mRNA.BJAM.scaffold7311.19138PKSB
mRNA.BJAM.scaffold7314.19139POTASSIUM CHANNEL, SUBFAMILY K
mRNA.BJAM.scaffold7316.19140SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold7316.19141
mRNA.BJAM.scaffold7316.19142SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold7316.19143
mRNA.BJAM.scaffold7316.19144
mRNA.BJAM.scaffold7317.19145
mRNA.BJAM.scaffold7319.19146SERUM RESPONSE FACTOR HOMOLOG
mRNA.BJAM.scaffold7319.19147CALCIUM-INDEPENDENT PHOSPHOLIPASE A2
mRNA.BJAM.scaffold7319.19148CALCIUM-INDEPENDENT PHOSPHOLIPASE A2
mRNA.BJAM.scaffold7319.19149CALCIUM-INDEPENDENT PHOSPHOLIPASE A2
mRNA.BJAM.scaffold7320.19150RIBOSOMAL RNA METHYLTRANSFERASE
mRNA.BJAM.scaffold7322.19151
mRNA.BJAM.scaffold7322.19152POTASSIUM CHANNEL, SUBFAMILY K
mRNA.BJAM.scaffold7322.19153TYROSINE-PROTEIN KINASE RECEPTOR
mRNA.BJAM.scaffold7323.19154ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold7323.19155ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold7323.19156
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