About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf8469_5.0
PE_Scaf8469_5.4ADULT RETINA PROTEIN
PE_Scaf8469_7.10DDB1- AND CUL4-ASSOCIATED FACTOR 10
PE_Scaf8469_7.13AGAP008228-PA
PE_Scaf8469_7.14AGAP008228-PA
PE_Scaf8469_7.16VACUOLAR ATP SYNTHASE SUBUNIT H
PE_Scaf8469_7.9ALPHA CATENIN
PE_Scaf8469_8.8DIHYDRODIPICOLINATE SYNTHASE
PE_Scaf8469_8.9RIBOSE-5-PHOSPHATE ISOMERASE
PE_Scaf8469_9.1-
PE_Scaf846_1.5
PE_Scaf8472_0.0
PE_Scaf8472_0.4FORKHEAD BOX PROTEIN BINIOU
PE_Scaf8476_0.4
PE_Scaf8477_0.5MYOSIN HEAVY CHAIN, NON-MUSCLE
PE_Scaf8477_3.6
PE_Scaf8477_4.4IQ DOMAIN-CONTAINING PROTEIN C
PE_Scaf8477_4.5
PE_Scaf8477_4.6SEPTIN
PE_Scaf8477_6.5RIBOSOMAL PROTEIN S6 KINASE
PE_Scaf8477_7.4FATTY ACID BINDING PROTEIN
PE_Scaf8477_7.5CYSTEINE-RICH SECRETORY PROTEIN-RELATED
PE_Scaf8479_0.3
PE_Scaf8479_1.4INNEXIN
PE_Scaf8479_1.8INNEXIN
PE_Scaf8479_2.3SURFEIT LOCUS PROTEIN
PE_Scaf8479_2.5PREFOLDIN SUBUNIT 6
PE_Scaf8479_3.2PROTEIN FAM78A
PE_Scaf8479_3.8SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE
PE_Scaf8479_6.4
PE_Scaf8479_7.1
PE_Scaf8479_7.14
PE_Scaf8479_7.15N-ACETYLGALACTOSAMINYLTRANSFERASE
PE_Scaf8479_7.16N-ACETYLGALACTOSAMINYLTRANSFERASE
PE_Scaf8480_0.3NADH-CYTOCHROME B5 REDUCTASE
PE_Scaf8480_1.3DUMPY: SHORTER THAN WILD-TYPE
PE_Scaf8480_2.2BESTROPHIN
PE_Scaf8480_3.3CCR4 NOT-RELATED
PE_Scaf8480_3.6
PE_Scaf8480_4.0
PE_Scaf8480_4.2
PE_Scaf8480_4.3-
PE_Scaf8481_0.0
PE_Scaf8481_0.1
PE_Scaf8481_0.2
PE_Scaf8481_0.5
PE_Scaf8482_0.12OS10G0105400 PROTEIN
PE_Scaf8482_0.13OS10G0105400 PROTEIN
PE_Scaf8482_0.16STANNIOCALCIN
PE_Scaf8483_2.1MACROGLOBULIN / COMPLEMENT
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