About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf8354_0.4
PE_Scaf8354_0.7
PE_Scaf8363_1.7OVOCHYMASE-RELATED
PE_Scaf8365_0.0
PE_Scaf8368_0.6D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH
PE_Scaf8368_2.15TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11
PE_Scaf8368_2.18SHIPPO-1-RELATED
PE_Scaf8368_2.19DEP DOMAIN-CONTAINING
PE_Scaf8368_2.20CHITINASE DOMAIN-CONTAINING PROTEIN 1 FAMILY MEMBER
PE_Scaf8368_2.23
PE_Scaf8368_2.24MIXED LINEAGE PROTEIN KINASE
PE_Scaf8368_2.25FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEIN
PE_Scaf8368_2.27ACID AMIDASE
PE_Scaf8378_0.5
PE_Scaf8378_0.6ZINC FINGER PROTEIN
PE_Scaf8378_1.1
PE_Scaf8378_1.11SET DOMAIN-CONTAINING PROTEIN-RELATED
PE_Scaf8378_1.12GLYCOGEN SYNTHASE KINASE-3 ALPHA
PE_Scaf8378_1.7TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED
PE_Scaf8378_1.9CYTOSINE-SPECIFIC METHYLTRANSFERASE
PE_Scaf837_1.0
PE_Scaf8380_0.0
PE_Scaf8382_0.3
PE_Scaf8384_0.0
PE_Scaf8387_0.3
PE_Scaf8389_0.4EGF-LIKE DOMAIN-CONTAINING PROTEIN
PE_Scaf8389_0.5
PE_Scaf8391_0.4PROMININ PROM PROTEIN
PE_Scaf8391_0.5TUDOR DOMAIN CONTAINING PROTEIN
PE_Scaf8393_0.2MUCIN-17
PE_Scaf8395_0.0
PE_Scaf8395_0.1
PE_Scaf8396_1.5ACROSIN-RELATED
PE_Scaf8396_3.12
PE_Scaf8396_3.19TRANSMEMBRANE PROTEASE SERINE
PE_Scaf8396_3.20TRANSMEMBRANE PROTEASE SERINE
PE_Scaf8396_3.6COAGULATION FACTOR
PE_Scaf83_0.0
PE_Scaf83_0.1
PE_Scaf83_0.2
PE_Scaf83_0.3
PE_Scaf8401_0.3
PE_Scaf8402_0.0
PE_Scaf8402_0.1
PE_Scaf8402_0.12
PE_Scaf8402_0.3
PE_Scaf8402_0.4
PE_Scaf8402_0.9S-ANTIGEN PROTEIN
PE_Scaf8403_0.4ANTIGEN BSP, PUTATIVE-RELATED
PE_Scaf8403_1.7SPARC OSTEONECTIN
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