About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf8273_0.6SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1
PE_Scaf8273_0.7BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1
PE_Scaf8276_1.0
PE_Scaf8278_2.11CYTOSOLIC CARBOXYPEPTIDASE
PE_Scaf8278_2.2
PE_Scaf8278_4.10(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME
PE_Scaf8278_4.12ESSENTIAL MCU REGULATOR, MITOCHONDRIAL
PE_Scaf8278_4.9TIGHT JUNCTION PROTEIN
PE_Scaf8281_2.4POLY ADP-RIBOSE GLYCOHYDROLASE
PE_Scaf8282_0.0
PE_Scaf8283_1.7BLR2807 PROTEIN
PE_Scaf8283_1.8
PE_Scaf8283_3.3BLR2807 PROTEIN
PE_Scaf8283_4.0
PE_Scaf8283_4.1RAS-ASSOCIATING DOMAIN CONTAINING PROTEIN
PE_Scaf8283_4.12
PE_Scaf8287_1.0
PE_Scaf828_0.0
PE_Scaf828_0.3
PE_Scaf828_0.7
PE_Scaf8294_0.10DNA-DIRECTED RNA POLYMERASE I,II,III
PE_Scaf8294_0.11
PE_Scaf8294_0.5SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
PE_Scaf8294_0.7SNARE PROTEINS
PE_Scaf8295_0.0
PE_Scaf8295_0.2
PE_Scaf8295_0.7
PE_Scaf8295_0.8
PE_Scaf8299_0.0
PE_Scaf8299_0.4
PE_Scaf829_2.0
PE_Scaf829_2.4
PE_Scaf82_0.2
PE_Scaf8303_0.0
PE_Scaf8303_0.7
PE_Scaf8303_0.8
PE_Scaf8304_4.2KINASE D-INTERACTING SUBSTRATE OF 220 KDA
PE_Scaf8305_0.0
PE_Scaf8305_0.6OVOCHYMASE-RELATED
PE_Scaf8305_0.7OVOCHYMASE-RELATED
PE_Scaf8305_0.8OVOCHYMASE-RELATED
PE_Scaf8307_1.11CELL FATE DETERMINING PROTEIN MAB21-RELATED
PE_Scaf8307_1.2CELL FATE DETERMINING PROTEIN MAB21-RELATED
PE_Scaf8308_1.6RIBOSOMAL PROTEIN S6 KINASE
PE_Scaf8308_1.7ZGC:194242
PE_Scaf8309_0.0
PE_Scaf8309_0.1
PE_Scaf8309_0.2
PE_Scaf830_0.5FORKHEAD BOX PROTEIN G1
PE_Scaf830_1.13BROMO ADJACENT HOMOLOGY DOMAIN-CONTAINING 1 PROTEIN
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